RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 SUN3Q8TAQ9 357 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 KAZALD1Q96I82 304 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 WACQ9BTA9 647 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 AGO4Q9HCK5 861 aaKnown RBP4.25□□□□□ -1.73
GTF3A-207ENST00000482655 TM7SF3Q9NS93 570 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 POT1Q9NUX5 634 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 LUZP4Q9P127 313 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 VPS4AQ9UN37 437 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 MAN2B2Q9Y2E5 1009 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 SETBP1Q9Y6X0 1596 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 GPATCH8Q9UKJ3 1502 aaKnown RBP4.25□□□□□ -1.73
GTF3A-207ENST00000482655 TNRQ92752 1358 aa4.25□□□□□ -1.73
GTF3A-207ENST00000482655 PZPP20742 1482 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 MBD5Q9P267 1494 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 SPATA31A1Q5TZJ5 1347 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 LY6G6EA0A0G2JKS1 128 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
GTF3A-207ENST00000482655 HMGB1P1B2RPK0 211 aaPredicted RBP4.24□□□□□ -1.73
GTF3A-207ENST00000482655 PODXLO00592 558 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 PIP5K1CO60331 668 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 NTN1O95631 604 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 PLAUP00749 431 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 CSTBP04080 98 aaKnown RBP4.24□□□□□ -1.73
GTF3A-207ENST00000482655 SNHG28P0DPA3 235 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 CTSAP10619 480 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 DRD1P21728 446 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 PAX3P23760 479 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 THBS4P35443 961 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 ME1P48163 572 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 POU5F1BQ06416 359 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 MTAPQ13126 283 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 BFSP2Q13515 415 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 TWIST1Q15672 202 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 AASDHQ4L235 1098 aaPredicted RBP4.24□□□□□ -1.73
GTF3A-207ENST00000482655 MRNIPQ6NTE8 343 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 USP17L6PQ6QN14 398 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 CRTC1Q6UUV9 634 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 IRF2BP2Q7Z5L9 587 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 NSMCE1Q8WV22 266 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 PIGKQ92643 395 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 TRMOQ9BU70 441 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 RNF26Q9BY78 433 aaPredicted RBP4.24□□□□□ -1.73
GTF3A-207ENST00000482655 STK33Q9BYT3 514 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.24□□□□□ -1.73
GTF3A-207ENST00000482655 UBA5Q9GZZ9 404 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 SAP30LQ9HAJ7 183 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 SLC39A10Q9ULF5 831 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 PCDHB2Q9Y5E7 798 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 HEMK1Q9Y5R4 338 aaPredicted RBP4.24□□□□□ -1.73
GTF3A-207ENST00000482655 HS3ST3B1Q9Y662 390 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 UBR1Q8IWV7 1749 aa4.24□□□□□ -1.73
GTF3A-207ENST00000482655 ZNF644Q9H582 1327 aaPredicted RBP4.23□□□□□ -1.73
GTF3A-207ENST00000482655 UGGT1Q9NYU2 1555 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 MIA2Q96PC5 1412 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 INSIG1O15503 277 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 ZSCAN9O15535 394 aaPredicted RBP4.23□□□□□ -1.73
GTF3A-207ENST00000482655 KCNAB3O43448 404 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 PBX1P40424 430 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 VPS41P49754 854 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 SLC12A2P55011 1212 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 ZACNQ401N2 412 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 ABLIM2Q6H8Q1 611 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 RFX8Q6ZV50 586 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 UBE2Q1Q7Z7E8 422 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 PIM3Q86V86 326 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.23□□□□□ -1.73
GTF3A-207ENST00000482655 UEVLDQ8IX04 471 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 ARFGAP1Q8N6T3 406 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 GRAMD1AQ96CP6 724 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 PRR11Q96HE9 360 aaPredicted RBP4.23□□□□□ -1.73
GTF3A-207ENST00000482655 SNX27Q96L92 541 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 FCRL5Q96RD9 977 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 RMDN3Q96TC7 470 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 EIF3CQ99613 913 aaKnown RBP4.23□□□□□ -1.73
GTF3A-207ENST00000482655 ISCA1Q9BUE6 129 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 SCNM1Q9BWG6 230 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 EBF3Q9H4W6 596 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 ABHD10Q9NUJ1 306 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 LRFN1Q9P244 771 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 HEY2Q9UBP5 337 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.23□□□□□ -1.73
GTF3A-207ENST00000482655 GTF2A1LQ9UNN4 478 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 SIRT4Q9Y6E7 314 aaPredicted RBP4.23□□□□□ -1.73
GTF3A-207ENST00000482655 DGKBQ9Y6T7 804 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 MROH1Q8NDA8 1641 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 ARHGAP23Q9P227 1491 aa4.23□□□□□ -1.73
GTF3A-207ENST00000482655 A0A087WZ62 844 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 FAM90A10PA6NDY2 464 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 H3BNX3 289 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 TRIM38O00635 465 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 RRHO14718 337 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 CNOT3O75175 753 aaKnown RBP4.22□□□□□ -1.73
GTF3A-207ENST00000482655 TULP3O75386 442 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 ARP10275 920 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 HSD3B1P14060 373 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 MATN1P21941 496 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 MST1P26927 711 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 DUSP1P28562 367 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 SLC5A2P31639 672 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 IGHMBP2P38935 993 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms