RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SUMO4Q6EEV6 95 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 FBXO42Q6P3S6 717 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 TMEM88Q6PEY1 159 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 PNLDC1Q8NA58 520 aaKnown RBP6.37□□□□□ -1.39
SF3B1-210ENST00000482158 ATP2A3Q93084 1043 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 REEP2Q9BRK0 252 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 HTATIP2Q9BUP3 242 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 PI4KBQ9UBF8 816 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 ZNHIT2Q9UHR6 403 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 CRYL1Q9Y2S2 319 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 VWA3AA6NCI4 1184 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 PRRT4C9JH25 899 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 UBE2Q2LH0YL09 131 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 CNTN5O94779 1100 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 SLC3A2P08195 630 aaKnown RBP6.36□□□□□ -1.39
SF3B1-210ENST00000482158 ALDOCP09972 364 aaKnown RBP6.36□□□□□ -1.39
SF3B1-210ENST00000482158 SOX2P48431 317 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 PCP4P48539 62 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 TLE2Q04725 743 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 CDK18Q07002 472 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 TMEM119Q4V9L6 283 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 RTL10Q7L3V2 364 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 ASB2Q96Q27 587 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 SENP7Q9BQF6 1050 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 PRDM16Q9HAZ2 1276 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 NOD2Q9HC29 1040 aa6.36□□□□□ -1.39
SF3B1-210ENST00000482158 TLR8Q9NR97 1041 aaKnown RBP6.36□□□□□ -1.39
SF3B1-210ENST00000482158 IFT80Q9P2H3 777 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-210ENST00000482158 NPIPB13A6NJU9 1138 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 NPIPB5A8MRT5 1133 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 NPIPB4C9JG80 1138 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 SEPT4O43236 478 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 HOXC11O43248 304 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-210ENST00000482158 PRPH2P23942 346 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 AVPR2P30518 371 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 PNPLA4P41247 253 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 TUBP50607 506 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 TUBA4AP68366 448 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 B4GALNT1Q00973 533 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 DLGAP5Q15398 846 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 CBWD5Q5RIA9 395 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 ZNF474Q6S9Z5 364 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-210ENST00000482158 ZNF788Q6ZQV5 615 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 MRIQ9BWK5 157 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 TM2D2Q9BX73 214 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 HDHD5Q9BXW7 423 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 CLPBQ9H078 707 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 OSBPL5Q9H0X9 879 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-210ENST00000482158 TMPRSS5Q9H3S3 457 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 SFXN1Q9H9B4 322 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 WASH6PQ9NQA3 447 aa6.35□□□□□ -1.39
SF3B1-210ENST00000482158 WIPF3A6NGB9 483 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 SAC3D1A6NKF1 404 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 TMEM232C9JQI7 657 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 LATS1O95835 1130 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 ENO1P06733 434 aaKnown RBP6.34□□□□□ -1.39
SF3B1-210ENST00000482158 BMP5P22003 454 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 ELLP55199 621 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-210ENST00000482158 NHLH1Q02575 133 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 THOC5Q13769 683 aaKnown RBP6.34□□□□□ -1.39
SF3B1-210ENST00000482158 ANKRD1Q15327 319 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 PFKFB3Q16875 520 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-210ENST00000482158 CC2D1BQ5T0F9 858 aaKnown RBP6.34□□□□□ -1.39
SF3B1-210ENST00000482158 ZNF782Q6ZMW2 699 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-210ENST00000482158 MDGA2Q7Z553 956 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 RHPN2Q8IUC4 686 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 C8orf58Q8NAV2 365 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 USP38Q8NB14 1042 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 SEMA6DQ8NFY4 1073 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 RBM17Q96I25 401 aaKnown RBP6.34□□□□□ -1.39
SF3B1-210ENST00000482158 ZNF347Q96SE7 839 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 EFHD1Q9BUP0 239 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 RIOX1Q9H6W3 641 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 TXNRD2Q9NNW7 524 aa6.34□□□□□ -1.39
SF3B1-210ENST00000482158 LINC01548A6NM66 108 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 KLK10O43240 276 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 NUDT3O95989 172 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 ARSAP15289 507 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 CERKLQ49MI3 558 aaPredicted RBP6.33□□□□□ -1.4
SF3B1-210ENST00000482158 STRIP1Q5VSL9 837 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 CCDC70Q6NSX1 233 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 ESX1Q8N693 406 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 ENDOVQ8N8Q3 282 aaKnown RBP6.33□□□□□ -1.4
SF3B1-210ENST00000482158 ADPRHL1Q8NDY3 354 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 HTRA1Q92743 480 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 DPF1Q92782 380 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 MASTLQ96GX5 879 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 PPP1R10Q96QC0 940 aaKnown RBP6.33□□□□□ -1.4
SF3B1-210ENST00000482158 FCRL5Q96RD9 977 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 ABHD14AQ9BUJ0 271 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 ARL8BQ9NVJ2 186 aa6.33□□□□□ -1.4
SF3B1-210ENST00000482158 MANSC4A6NHS7 340 aaPredicted RBP6.32□□□□□ -1.4
SF3B1-210ENST00000482158 DSCR3O14972 297 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 DHX16O60231 1041 aaKnown RBP6.32□□□□□ -1.4
SF3B1-210ENST00000482158 SGPL1O95470 568 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 CPA1P15085 419 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 TGM2P21980 687 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 ADPRHP54922 357 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 YPEL5P62699 121 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 SEMA3AQ14563 771 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms