RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TAS1R1Q7RTX1 841 aa14.87□□□□□ -0.03
CHD3-211ENST00000481999 PALM2Q8IXS6 379 aa14.87□□□□□ -0.03
CHD3-211ENST00000481999 UNC5BQ8IZJ1 945 aa14.87□□□□□ -0.03
CHD3-211ENST00000481999 THEM5Q8N1Q8 247 aa14.87□□□□□ -0.03
CHD3-211ENST00000481999 TFB1MQ8WVM0 346 aaKnown RBP14.87□□□□□ -0.03
CHD3-211ENST00000481999 CASP10Q92851 521 aa14.87□□□□□ -0.03
CHD3-211ENST00000481999 FAM193BQ96PV7 902 aaPredicted RBP14.87□□□□□ -0.03
CHD3-211ENST00000481999 OR12D3Q9UGF7 316 aa14.87□□□□□ -0.03
CHD3-211ENST00000481999 ZMYND8Q9ULU4 1186 aaPredicted RBP14.87□□□□□ -0.03
CHD3-211ENST00000481999 MAGED2Q9UNF1 606 aaPredicted RBP14.87□□□□□ -0.03
CHD3-211ENST00000481999 PHF24Q9UPV7 400 aa14.87□□□□□ -0.03
CHD3-211ENST00000481999 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.87□□□□□ -0.03
CHD3-211ENST00000481999 PDE4DIPQ5VU43 2346 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 TCRBV9S1A1TA0A576 114 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 TNFRSF10BO14763 440 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 DCLK1O15075 740 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 EDF1O60869 148 aaKnown RBP14.86□□□□□ -0.03
CHD3-211ENST00000481999 ATP5HO75947 161 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 LRIG2O94898 1065 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 MOCS2O96007 188 aaPredicted RBP14.86□□□□□ -0.03
CHD3-211ENST00000481999 F7P08709 466 aaPredicted RBP14.86□□□□□ -0.03
CHD3-211ENST00000481999 SKIP12755 728 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 TSHRP16473 764 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 KRT4P19013 534 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 YWHAGP61981 247 aaKnown RBP eCLIP14.86□□□□□ -0.03
CHD3-211ENST00000481999 ARHGEF6Q15052 776 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 PM20D1Q6GTS8 502 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 SCD5Q86SK9 330 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 ABI1Q8IZP0 508 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 KIF2BQ8N4N8 673 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 BCL7CQ8WUZ0 217 aaPredicted RBP14.86□□□□□ -0.03
CHD3-211ENST00000481999 RNF208Q9H0X6 261 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 IL1RAPL1Q9NZN1 696 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 TEX264Q9Y6I9 313 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 SQORQ9Y6N5 450 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.86□□□□□ -0.03
CHD3-211ENST00000481999 RNF103O00237 685 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 UGT1A9O60656 530 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 USP12O75317 370 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 DCTN3O75935 186 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 TBX18O95935 607 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 KRT16P08779 473 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 EPHB2P29323 1055 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 TPI1P60174 286 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 SEMA3BQ13214 749 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 SLC1A5Q15758 541 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 KBTBD12Q3ZCT8 623 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 ANKRD20A2Q5SQ80 823 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 ANKRD20A1Q5TYW2 823 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 ANKRD20A3Q5VUR7 823 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 PDCD7Q8N8D1 485 aaKnown RBP14.86□□□□□ -0.03
CHD3-211ENST00000481999 ANKLE1Q8NAG6 615 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 GIMAP7Q8NHV1 300 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 URGCPQ8TCY9 931 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 SPOCK2Q92563 424 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 TBC1D31Q96DN5 1066 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 AGAP3Q96P47 875 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 CASD1Q96PB1 797 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 MYCBPQ99417 103 aaPredicted RBP14.86□□□□□ -0.03
CHD3-211ENST00000481999 PAFAH2Q99487 392 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 DHRS4Q9BTZ2 278 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 UGT1A7Q9HAW7 530 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 UGT1A10Q9HAW8 530 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 UGT1A8Q9HAW9 530 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 NDFIP2Q9NV92 336 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 SLC17A6Q9P2U8 582 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 GRID1Q9ULK0 1009 aa14.86□□□□□ -0.03
CHD3-211ENST00000481999 EYSQ5T1H1 3165 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 A0A1W2PQH9 124 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 CXorf49A8MYA2 514 aaPredicted RBP14.85□□□□□ -0.03
CHD3-211ENST00000481999 H3BRJ5 948 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 GNRH1P01148 92 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 PSMB4P28070 264 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 CYP2C18P33260 490 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 SLC11A1P49279 550 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 PLEKHG4Q58EX7 1191 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 ADGRD1Q6QNK2 874 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 ARHGAP36Q6ZRI8 547 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 CDKL3Q8IVW4 592 aaPredicted RBP14.85□□□□□ -0.03
CHD3-211ENST00000481999 VPS52Q8N1B4 723 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 UROC1Q96N76 676 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 LRRC37BQ96QE4 947 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 KLC2Q9H0B6 622 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 SLCO1B3Q9NPD5 702 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 MARCH5Q9NX47 278 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 DSEQ9UL01 958 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 PCDHB8Q9UN66 801 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 MYO16Q9Y6X6 1858 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 HGSO14964 777 aaPredicted RBP14.85□□□□□ -0.03
CHD3-211ENST00000481999 CHADO15335 359 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 INPPL1O15357 1258 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 ATP2A2P16615 1042 aaKnown RBP14.85□□□□□ -0.03
CHD3-211ENST00000481999 MSH2P43246 934 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 WASHC5Q12768 1159 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 RTP2Q5QGT7 225 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 RWDD4Q6NW29 188 aaKnown RBP14.85□□□□□ -0.03
CHD3-211ENST00000481999 TRMT10BQ6PF06 316 aaKnown RBP14.85□□□□□ -0.03
CHD3-211ENST00000481999 VSIG1Q86XK7 387 aa14.85□□□□□ -0.03
CHD3-211ENST00000481999 ALKBH8Q96BT7 664 aaKnown RBP14.85□□□□□ -0.03
CHD3-211ENST00000481999 RAB3IPQ96QF0 476 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms