RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 FAM183BPQ6ZVS7 135 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 RNF34Q969K3 372 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 LMLNQ96KR4 655 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 MTG2Q9H4K7 406 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 SYNCQ9H7C4 482 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 FBRSQ9HAH7 460 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 DDIT4Q9NX09 232 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 SUN2Q9UH99 717 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 SLC12A6Q9UHW9 1150 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 INTS6Q9UL03 887 aaKnown RBP22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 CEP83Q9Y592 693 aa22.99■■□□□ 1.27
GPCPD1-206ENST00000481690 A0A1B0GTW7 788 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 METTL12A8MUP2 240 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 F5H5T6 163 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 FOXN3O00409 490 aaPredicted RBP22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 HSF2BPO75031 334 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 MOCS3O95396 460 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 ASLP04424 464 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 ERCC5P28715 1186 aaPredicted RBP22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 ANP32AP39687 249 aaKnown RBP22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 RPS14P62263 151 aaKnown RBP22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 RAPGEF1Q13905 1077 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 PITRM1Q5JRX3 1037 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 EFHC1Q5JVL4 640 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 MIIPQ5JXC2 388 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 SLC47A2Q86VL8 602 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 DNASE2BQ8WZ79 361 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 TTC17Q96AE7 1141 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 SLC2A13Q96QE2 648 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 PLCB1Q9NQ66 1216 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 CHD8Q9HCK8 2581 aa22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 MAP1BP46821 2468 aaKnown RBP22.98■■□□□ 1.27
GPCPD1-206ENST00000481690 ERBB2P04626 1255 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 GLI1P08151 1106 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 ABCB4P21439 1286 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 ACSL1P33121 698 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 CLCN1P35523 988 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 SHC2P98077 582 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 GRIK2Q13002 908 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 SEMA3BQ13214 749 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 KCNJ12Q14500 433 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 TTC31Q49AM3 519 aaPredicted RBP22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 ZNF776Q68DI1 518 aaPredicted RBP22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 C11orf57Q6ZUT1 292 aaPredicted RBP22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 PDCL3Q9H2J4 239 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 ASNSD1Q9NWL6 643 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 KIAA1522Q9P206 1035 aaPredicted RBP22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 EIF2B4Q9UI10 523 aaKnown RBP22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 NFE2L3Q9Y4A8 694 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 PCNX2A6NKB5 2137 aa22.97■■□□□ 1.27
GPCPD1-206ENST00000481690 KCNU1A8MYU2 1149 aa22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 CCR1P32246 355 aa22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 CTSOP43234 321 aaPredicted RBP22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 NUMBP49757 651 aa22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 SNX16P57768 344 aa22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 PTPN20Q4JDL3 420 aa22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 OLFML1Q6UWY5 402 aa22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 CIR1Q86X95 450 aaPredicted RBP22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 DHX40Q8IX18 779 aaKnown RBP22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 MYO19Q96H55 970 aa22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 C6orf106Q9H6K1 298 aaPredicted RBP22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 ERVW-1Q9UQF0 538 aa22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 FHOD1Q9Y613 1164 aa22.96■■□□□ 1.27
GPCPD1-206ENST00000481690 FAM170AA1A519 330 aa22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 BCAT2O15382 392 aaPredicted RBP22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 SLC2A3P11169 496 aa22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 ZBTB16Q05516 673 aa22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 NME3Q13232 169 aa22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 DRAP1Q14919 205 aaPredicted RBP22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 RNF219Q5W0B1 726 aaPredicted RBP22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 PIP4P1Q86T03 277 aa22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 APCDD1Q8J025 514 aa22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 GANCQ8TET4 914 aa22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 MRGPRX3Q96LB0 322 aa22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 BTBD1Q9H0C5 482 aa22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 SAMSN1Q9NSI8 373 aaKnown RBP22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 DNAAF2Q9NVR5 837 aaKnown RBP22.95■■□□□ 1.26
GPCPD1-206ENST00000481690 SPAARA0A1B0GVQ0 90 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 SIN3BO75182 1162 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 DAB1O75553 588 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 SEMA4FO95754 770 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 BPIFB4P59827 614 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 SLC6A3Q01959 620 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 EIF4EBP2Q13542 120 aaPredicted RBP22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 ST3GAL2Q16842 350 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 HNRNPA1L2Q32P51 320 aaKnown RBP22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 RABGAP1LQ5R372 815 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 FAM71AQ8IYT1 594 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 PCED1AQ9H1Q7 454 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 RSPH9Q9H1X1 276 aaPredicted RBP22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 TP53BP1Q12888 1972 aaPredicted RBP22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 TMEM131Q92545 1883 aa22.94■■□□□ 1.26
GPCPD1-206ENST00000481690 CACNA1BQ00975 2339 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 EPG5Q9HCE0 2579 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 TTC34A8MYJ7 566 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 UPK3BL1B0FP48 263 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 UPK3BL2E5RIL1 263 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 RNASEH1O60930 286 aaKnown RBP22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 SRPRAP08240 638 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms