RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 HSP90AA4PQ58FG1 418 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 CHSY1Q86X52 802 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 DEFB106AQ8N104 65 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 MLKLQ8NB16 471 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 MRGPRX3Q96LB0 322 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 DNAAF2Q9NVR5 837 aaKnown RBP19.22■□□□□ 0.67
CLK1-211ENST00000481641 COX16Q9P0S2 106 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 SUN2Q9UH99 717 aa19.22■□□□□ 0.67
CLK1-211ENST00000481641 TYW5A2RUC4 315 aaKnown RBP19.21■□□□□ 0.67
CLK1-211ENST00000481641 C1QTNF9BB2RNN3 333 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 BCAT2O15382 392 aaPredicted RBP19.21■□□□□ 0.67
CLK1-211ENST00000481641 SH3BP5O60239 455 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 LUC7L3O95232 432 aaKnown RBP19.21■□□□□ 0.67
CLK1-211ENST00000481641 IGLV3-25P01717 112 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 C1QTNF9P0C862 333 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 BNC1Q01954 994 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 PITRM1Q5JRX3 1037 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 CIR1Q86X95 450 aaPredicted RBP19.21■□□□□ 0.67
CLK1-211ENST00000481641 DHX40Q8IX18 779 aaKnown RBP19.21■□□□□ 0.67
CLK1-211ENST00000481641 APCDD1Q8J025 514 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 C1orf131Q8NDD1 294 aaKnown RBP19.21■□□□□ 0.67
CLK1-211ENST00000481641 C1orf216Q8TAB5 229 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 PPP1R13BQ96KQ4 1090 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 FAM81BQ96LP2 452 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 SCNM1Q9BWG6 230 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 CLSTN2Q9H4D0 955 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 IL21RQ9HBE5 538 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 PLCB1Q9NQ66 1216 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 DNAJC12Q9UKB3 198 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 NFE2L3Q9Y4A8 694 aa19.21■□□□□ 0.67
CLK1-211ENST00000481641 FAM170AA1A519 330 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 GTPBP10A4D1E9 387 aaKnown RBP19.2■□□□□ 0.66
CLK1-211ENST00000481641 H0Y626 953 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 FOXN3O00409 490 aaPredicted RBP19.2■□□□□ 0.66
CLK1-211ENST00000481641 SIN3BO75182 1162 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 DNTTP04053 509 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 CLCN1P35523 988 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 ST8SIA6P61647 398 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 EIF4EBP2Q13542 120 aaPredicted RBP19.2■□□□□ 0.66
CLK1-211ENST00000481641 DPCR1Q3MIW9 517 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 OR6B2Q6IFH4 312 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 FAM183BPQ6ZVS7 135 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 SLC47A2Q86VL8 602 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 ZNF557Q8N988 423 aaPredicted RBP19.2■□□□□ 0.66
CLK1-211ENST00000481641 SLC2A13Q96QE2 648 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 TRIM62Q9BVG3 475 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 FAM204AQ9H8W3 233 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 PCDHGC3Q9UN70 934 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 ERVW-1Q9UQF0 538 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 AKAP13Q12802 2813 aa19.2■□□□□ 0.66
CLK1-211ENST00000481641 A0A1B0GVT2 93 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 TTC34A8MYJ7 566 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 HYAL3O43820 417 aaPredicted RBP19.19■□□□□ 0.66
CLK1-211ENST00000481641 SEMA4FO95754 770 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 ERBB2P04626 1255 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 C7P10643 843 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 CSNK1EP49674 416 aaKnown RBP19.19■□□□□ 0.66
CLK1-211ENST00000481641 MAN2A1Q16706 1144 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 ZNF776Q68DI1 518 aaPredicted RBP19.19■□□□□ 0.66
CLK1-211ENST00000481641 DPY19L2P1Q6NXN4 242 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 CCDC117Q8IWD4 279 aaPredicted RBP19.19■□□□□ 0.66
CLK1-211ENST00000481641 ATP6V0D2Q8N8Y2 350 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 BTN2A3PQ96KV6 586 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 RPL10LQ96L21 214 aaKnown RBP19.19■□□□□ 0.66
CLK1-211ENST00000481641 PRMT1Q99873 361 aaKnown RBP19.19■□□□□ 0.66
CLK1-211ENST00000481641 BTBD1Q9H0C5 482 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 RSPH9Q9H1X1 276 aaPredicted RBP19.19■□□□□ 0.66
CLK1-211ENST00000481641 FBRSQ9HAH7 460 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 DDIT4Q9NX09 232 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 KIAA1522Q9P206 1035 aaPredicted RBP19.19■□□□□ 0.66
CLK1-211ENST00000481641 SLCO3A1Q9UIG8 710 aa19.19■□□□□ 0.66
CLK1-211ENST00000481641 KCNU1A8MYU2 1149 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 F5H5T6 163 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 FSBPO95073 299 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 ASLP04424 464 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 CDK17Q00537 523 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 PTK2Q05397 1052 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 HNRNPA1L2Q32P51 320 aaKnown RBP19.18■□□□□ 0.66
CLK1-211ENST00000481641 MIIPQ5JXC2 388 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 C9orf64Q5T6V5 341 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 GANCQ8TET4 914 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 RNF34Q969K3 372 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 BIRC7Q96CA5 298 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 ADAM33Q9BZ11 813 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 NDST4Q9H3R1 872 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 GAREM1Q9H706 876 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLK1-211ENST00000481641 SERGEFQ9UGK8 458 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.18■□□□□ 0.66
CLK1-211ENST00000481641 CEP83Q9Y592 693 aa19.18■□□□□ 0.66
CLK1-211ENST00000481641 PRKCSHP14314 528 aaPredicted RBP19.17■□□□□ 0.66
CLK1-211ENST00000481641 PDGFRAP16234 1089 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 MZF1P28698 734 aaPredicted RBP19.17■□□□□ 0.66
CLK1-211ENST00000481641 KRT9P35527 623 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 GGCXP38435 758 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 STK19P49842 368 aaPredicted RBP19.17■□□□□ 0.66
CLK1-211ENST00000481641 IRAK1P51617 712 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 ECT2LQ008S8 904 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 ZBTB16Q05516 673 aa19.17■□□□□ 0.66
CLK1-211ENST00000481641 HLA-BQ31612 363 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms