RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SLC10A5Q5PT55 438 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 TTI2Q6NXR4 508 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 WDR93Q6P2C0 686 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 ACSM6Q6P461 480 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 KLHL35Q6PF15 583 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 PLEKHH3Q7Z736 793 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 FAM124AQ86V42 546 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 CAND1Q86VP6 1230 aaKnown RBP5.71□□□□□ -1.5
COPA-203ENST00000481040 MAPKAPK5Q8IW41 473 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 ADGRF2Q8IZF7 708 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 ARHGEF2Q92974 986 aaKnown RBP5.71□□□□□ -1.5
COPA-203ENST00000481040 KLHL29Q96CT2 875 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 WDYHV1Q96HA8 205 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 VPS50Q96JG6 964 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 LMF1Q96S06 567 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 RABEP2Q9H5N1 569 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 KAT14Q9H8E8 782 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 SEC61A2Q9H9S3 476 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 GRPEL1Q9HAV7 217 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 ATP8A2Q9NTI2 1148 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 KCNE5Q9UJ90 142 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 COPG1Q9Y678 874 aaKnown RBP5.71□□□□□ -1.5
COPA-203ENST00000481040 CYP3A7-CYP3A51PA0A087WV96 503 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 TEX13CA0A0J9YWL9 993 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 FAM237BA0A1B0GVD1 139 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 C16orf96A6NNT2 1141 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 GCOM1H8Y6P7 765 aaPredicted RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 PSMD9O00233 223 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 ZNF213O14771 459 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 CLGNO14967 610 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 PER2O15055 1255 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 ZNF185O15231 689 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 BCAT2O15382 392 aaPredicted RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 ADAM20O43506 726 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 PDE8BO95263 885 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 HSP90AB1P08238 724 aaKnown RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 ELANEP08246 267 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 ARSAP15289 507 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 CDH2P19022 906 aaPredicted RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 CYP3A7P24462 503 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 AVPR2P30518 371 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 APOBEC3AP31941 199 aaPredicted RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 IGHMBP2P38935 993 aaKnown RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 PBX3P40426 434 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 ARHGAP8P85298 464 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 AIMP1Q12904 312 aaKnown RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 AIMP2Q13155 320 aaKnown RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 IRF3Q14653 427 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 CCDC92Q53HC0 331 aaPredicted RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 SH2D4BQ5SQS7 431 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 C1QL3Q5VWW1 255 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 CDC73Q6P1J9 531 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 ZNF808Q8N4W9 903 aaPredicted RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 AFAP1L1Q8TED9 768 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 KCNJ9Q92806 393 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 GLG1Q92896 1179 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 INTS12Q96CB8 462 aaKnown RBP5.7□□□□□ -1.5
COPA-203ENST00000481040 RSPRY1Q96DX4 576 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 CMTM3Q96MX0 182 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 ACTRT3Q9BYD9 372 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 KRTAP17-1Q9BYP8 105 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 TPSD1Q9BZJ3 242 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 EDEM3Q9BZQ6 932 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 GLOD4Q9HC38 313 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 PCDHB2Q9Y5E7 798 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 PCDHGB5Q9Y5G0 923 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 FAM169AQ9Y6X4 670 aa5.7□□□□□ -1.5
COPA-203ENST00000481040 A1L4Q6 167 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 FRMD3A2A2Y4 597 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 NPIPB13A6NJU9 1138 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 C3orf70A6NLC5 250 aaPredicted RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 NPIPB5A8MRT5 1133 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 A8MV72 311 aaPredicted RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 NPIPB4C9JG80 1138 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 DIRC3C9JPN6 131 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 LDLRAD4O15165 306 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 CA12O43570 354 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 SPRY2O43597 315 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 NUAK1O60285 661 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 HNRNPCL1O60812 293 aaKnown RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 ENTPD3O75355 529 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 ALDOAP04075 364 aaKnown RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 PDHA1P08559 390 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 SCG2P13521 617 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 GATA3P23771 443 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 ADRA1DP25100 572 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 CXCR5P32302 372 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 MCM5P33992 734 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 TNNT3P45378 269 aaPredicted RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 PPP5CP53041 499 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 UBXN2AP68543 259 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 OLR1P78380 273 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 EFNB1P98172 346 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 KIAA2012Q0VF49 1180 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 KYNUQ16719 465 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 GEN1Q17RS7 908 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 PDCD4Q53EL6 469 aaKnown RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 RAB41Q5JT25 222 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 LRCH2Q5VUJ6 765 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 GARNL3Q5VVW2 1013 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms