RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 TBC1D3CQ6IPX1 549 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 RFWD3Q6PCD5 774 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 SND1Q7KZF4 910 aaKnown RBP eCLIP13.9□□□□□ -0.18
NDC1-202ENST00000480952 SLC9A9Q8IVB4 645 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 TBC1D3Q8IZP1 549 aaPredicted RBP13.9□□□□□ -0.18
NDC1-202ENST00000480952 LSMEM2Q8N112 164 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 ZNF557Q8N988 423 aaPredicted RBP13.9□□□□□ -0.18
NDC1-202ENST00000480952 MFSD2AQ8NA29 543 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 CCDC150Q8NCX0 1101 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 WFDC5Q8TCV5 224 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 NDRG1Q92597 394 aaKnown RBP13.9□□□□□ -0.18
NDC1-202ENST00000480952 EDEM1Q92611 657 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 HIC2Q96JB3 615 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 ULBP1Q9BZM6 244 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 MAGEF1Q9HAY2 307 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 STIM2Q9P246 746 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 TPX2Q9ULW0 747 aaKnown RBP13.9□□□□□ -0.18
NDC1-202ENST00000480952 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 PCDHB1Q9Y5F3 818 aa13.9□□□□□ -0.18
NDC1-202ENST00000480952 MYO18BQ8IUG5 2567 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 SPTLC2O15270 562 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 KLK10O43240 276 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 SIGLEC6O43699 453 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 SLC28A2O43868 658 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 MAGEC1O60732 1142 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 SDC3O75056 442 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 WISP1O95388 367 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 NR3C1P04150 777 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 ASLP04424 464 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 GOT1P17174 413 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 SYT1P21579 422 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 CSKP41240 450 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 PSMD8P48556 350 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 NASPP49321 788 aaPredicted RBP13.89□□□□□ -0.19
NDC1-202ENST00000480952 DAB2P98082 770 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 ZNF211Q13398 564 aaPredicted RBP13.89□□□□□ -0.19
NDC1-202ENST00000480952 PROX2Q3B8N5 592 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 C8orf34Q49A92 452 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 HS1BP3Q53T59 392 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 MPP7Q5T2T1 576 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 C9orf64Q5T6V5 341 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 PIK3R6Q5UE93 754 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 PM20D1Q6GTS8 502 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 KANSL1Q7Z3B3 1105 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 PRPF39Q86UA1 669 aaKnown RBP13.89□□□□□ -0.19
NDC1-202ENST00000480952 SPATS2Q86XZ4 545 aaKnown RBP13.89□□□□□ -0.19
NDC1-202ENST00000480952 MFN1Q8IWA4 741 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 ANKRD52Q8NB46 1076 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 TAS1R2Q8TE23 839 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 KCNE4Q8WWG9 221 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 TTC17Q96AE7 1141 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 MYO19Q96H55 970 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 IPO9Q96P70 1041 aaKnown RBP13.89□□□□□ -0.19
NDC1-202ENST00000480952 LRRC4Q9HBW1 653 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 HECTD1Q9ULT8 2610 aa13.89□□□□□ -0.19
NDC1-202ENST00000480952 GOLGA6L7A0A1B0GV03 622 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 TARSL2A2RTX5 802 aaKnown RBP13.88□□□□□ -0.19
NDC1-202ENST00000480952 TRIM38O00635 465 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 POLR2DO15514 142 aaKnown RBP13.88□□□□□ -0.19
NDC1-202ENST00000480952 MSI1O43347 362 aaKnown RBP13.88□□□□□ -0.19
NDC1-202ENST00000480952 AFMP43652 599 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 GCLMP48507 274 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 SLC11A2P49281 568 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 VAMP7P51809 220 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 ADPRHP54922 357 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 GABREP78334 506 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 VAC14Q08AM6 782 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 CUL4BQ13620 913 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 C1orf220Q5T0J3 134 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 BSPRYQ5W0U4 402 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 NAPEPLDQ6IQ20 393 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 CCDC117Q8IWD4 279 aaPredicted RBP13.88□□□□□ -0.19
NDC1-202ENST00000480952 AADATQ8N5Z0 425 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 FIBINQ8TAL6 211 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 TMEM174Q8WUU8 243 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 MMRN2Q9H8L6 949 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 CEP83Q9Y592 693 aa13.88□□□□□ -0.19
NDC1-202ENST00000480952 EDDM13A0A1B0GTR0 161 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 TTC34A8MYJ7 566 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 PDXKO00764 312 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 IRAK2O43187 625 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 PPP6R2O75170 966 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 USP12O75317 370 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 ADH1BP00325 375 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 C5AR1P21730 350 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 ERVPABLB-1P60509 514 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 PPP2CBP62714 309 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 PPP2CAP67775 309 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 STK4Q13043 487 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 STAT4Q14765 748 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 ARID5BQ14865 1188 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 ARHGAP17Q68EM7 881 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 SHC4Q6S5L8 630 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.87□□□□□ -0.19
NDC1-202ENST00000480952 BHLHA9Q7RTU4 235 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 IQCHQ86VS3 1027 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 UNC45BQ8IWX7 931 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 CARNMT1Q8N4J0 409 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 TTC39CQ8N584 583 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms