RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 ARL14EPQ8N8R7 260 aaPredicted RBP15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 RTL3Q8N8U3 475 aaKnown RBP15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 TFB1MQ8WVM0 346 aaKnown RBP15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 IFT81Q8WYA0 676 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 LRRC45Q96CN5 670 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 RTP4Q96DX8 246 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 SNF8Q96H20 258 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 TRIM31Q9BZY9 425 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 ZYG11BQ9C0D3 744 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 ARFGAP3Q9NP61 516 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 DZANK1Q9NVP4 752 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 SNX24Q9Y343 169 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 MFHAS1Q9Y4C4 1052 aa15.24■□□□□ 0.03
SNRNP200-205ENST00000480835 CEP290O15078 2479 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 DOCK6Q96HP0 2047 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 NOTCH4Q99466 2003 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 ESYT3A0FGR9 886 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 F5H5T6 163 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 MTSS1O43312 755 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 RHOP08100 348 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 CORO1AP31146 461 aaKnown RBP15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 GGCXP38435 758 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 ADCY8P40145 1251 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 RPL21P46778 160 aaKnown RBP15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 NRIP1P48552 1158 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 RGS19P49795 217 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 CLCN6P51797 869 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 ZNF33AQ06730 810 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 GALNT2Q10471 571 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 CALCOCO2Q13137 446 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 HLTFQ14527 1009 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 RAP1GAP2Q684P5 730 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 EMBQ6PCB8 327 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 DDX42Q86XP3 938 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 SHKBP1Q8TBC3 707 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 ZFRQ96KR1 1074 aaKnown RBP15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 HINFPQ9BQA5 517 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 TASP1Q9H6P5 420 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 SFXN1Q9H9B4 322 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 USP29Q9HBJ7 922 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 GKN1Q9NS71 199 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 TMEM248Q9NWD8 314 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 DNMT3BQ9UBC3 853 aaKnown RBP15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 LSM7Q9UK45 103 aaKnown RBP15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 VANGL2Q9ULK5 521 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 ZNF510Q9Y2H8 683 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 CPQQ9Y646 472 aa15.23■□□□□ 0.03
SNRNP200-205ENST00000480835 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 CCDC195A0A1B0GUA6 201 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 A0A1W2PRU2 124 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 EPOPA6NHQ4 379 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 STK10O94804 968 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 IFNB1P01574 187 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 CKMP06732 381 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 IVDP26440 423 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 RBL1P28749 1068 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 NDST2P52849 883 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 KCNC3Q14003 757 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 PRKD1Q15139 912 aaPredicted RBP15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 TRIP13Q15645 432 aaPredicted RBP15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 RABGAP1LQ5R372 815 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 ADGRF1Q5T601 910 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 HEATR6Q6AI08 1181 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 NADSYN1Q6IA69 706 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 FBXL22Q6P050 247 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 PCGF5Q86SE9 256 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 RBM23Q86U06 439 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 NLRP14Q86W24 1093 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 DENND1CQ8IV53 801 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 MAB21L3Q8N8X9 362 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 FAM71DQ8N9W8 422 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 AENQ8WTP8 325 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 HDAC11Q96DB2 347 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 RPRD1AQ96P16 312 aaPredicted RBP15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 SLC22A12Q96S37 553 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 PRDM12Q9H4Q4 367 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 HCFC1R1Q9NWW0 138 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 GRHL1Q9NZI5 618 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 PAK5Q9P286 719 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 MTRF1LQ9UGC7 380 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 STOML2Q9UJZ1 356 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 NFU1Q9UMS0 254 aa15.22■□□□□ 0.03
SNRNP200-205ENST00000480835 C5orf60A6NFR6 353 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 SMAPO00193 183 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 DNALI1O14645 258 aaPredicted RBP15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 KCNN4O15554 427 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 SEC31AO94979 1220 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 MYBL2P10244 700 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 IRF1P10914 325 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 MAPKAPK2P49137 400 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 GDF10P55107 478 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 PPIDQ08752 370 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 P3H1Q32P28 736 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 FAM133BQ5BKY9 247 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 PRSS36Q5K4E3 855 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 BEND6Q5SZJ8 279 aaPredicted RBP15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 GPR158Q5T848 1215 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 TTC39BQ5VTQ0 682 aaPredicted RBP15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 AFMIDQ63HM1 303 aa15.21■□□□□ 0.03
SNRNP200-205ENST00000480835 LGI2Q8N0V4 545 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms