RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SLC10A2Q12908 348 aaPredicted RBP18.11■□□□□ 0.49
UPF3A-206ENST00000480362 CES5AQ6NT32 575 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 RFWD3Q6PCD5 774 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 ARID3BQ8IVW6 561 aaPredicted RBP18.11■□□□□ 0.49
UPF3A-206ENST00000480362 SLC35B2Q8TB61 432 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 UBXN4Q92575 508 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 MYEOVQ96EZ4 313 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 RPRD1AQ96P16 312 aaPredicted RBP18.11■□□□□ 0.49
UPF3A-206ENST00000480362 LRRC1Q9BTT6 524 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.11■□□□□ 0.49
UPF3A-206ENST00000480362 DNPEPQ9ULA0 475 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 ZNF510Q9Y2H8 683 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 V9GYY5 206 aaPredicted RBP18.11■□□□□ 0.49
UPF3A-206ENST00000480362 E2F8A0AVK6 867 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 TRDMT1O14717 391 aaKnown RBP18.1■□□□□ 0.49
UPF3A-206ENST00000480362 MFSD11O43934 449 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 TSPAN3O60637 253 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 CNTN5O94779 1100 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 MAP3K6O95382 1288 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 RHOQP17081 205 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 FNTAP49354 379 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 BYSLQ13895 437 aaKnown RBP18.1■□□□□ 0.49
UPF3A-206ENST00000480362 COL19A1Q14993 1142 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 NOMO1Q15155 1222 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 C5orf22Q49AR2 442 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 DRICH1Q6PGQ1 229 aaPredicted RBP18.1■□□□□ 0.49
UPF3A-206ENST00000480362 GET4Q7L5D6 327 aaPredicted RBP18.1■□□□□ 0.49
UPF3A-206ENST00000480362 NPAS3Q8IXF0 933 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 CCDC105Q8IYK2 499 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 CCDC26Q8TAB7 109 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 ZSCAN18Q8TBC5 510 aaPredicted RBP18.1■□□□□ 0.49
UPF3A-206ENST00000480362 FGF13Q92913 245 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 PABPC5Q96DU9 382 aaKnown RBP18.1■□□□□ 0.49
UPF3A-206ENST00000480362 RUNDC3BQ96NL0 473 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 DTLQ9NZJ0 730 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 PCYOX1Q9UHG3 505 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 AMACRQ9UHK6 382 aa18.1■□□□□ 0.49
UPF3A-206ENST00000480362 DRG1Q9Y295 367 aaKnown RBP18.1■□□□□ 0.49
UPF3A-206ENST00000480362 HELZP42694 1942 aaKnown RBP18.1■□□□□ 0.49
UPF3A-206ENST00000480362 PRRC2BQ5JSZ5 2229 aaKnown RBP18.09■□□□□ 0.49
UPF3A-206ENST00000480362 WASH4PA8MWX3 477 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 MCF2LO15068 1137 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 RAD51CO43502 376 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 RBP3P10745 1247 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 WEE1P30291 646 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 PTGIRP43119 386 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 VCPP55072 806 aaKnown RBP18.09■□□□□ 0.49
UPF3A-206ENST00000480362 ERCC6LQ2NKX8 1250 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 ALFQ53S48 1182 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 RABGAP1LQ5R372 815 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 C8orf74Q6P047 294 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 BZW1Q7L1Q6 419 aaKnown RBP18.09■□□□□ 0.49
UPF3A-206ENST00000480362 ZC3H18Q86VM9 953 aaKnown RBP18.09■□□□□ 0.49
UPF3A-206ENST00000480362 NLRP14Q86W24 1093 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 CIR1Q86X95 450 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-206ENST00000480362 BBS7Q8IWZ6 715 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 CFAP52Q8N1V2 620 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 CCDC33Q8N5R6 958 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 NPWQ8N729 165 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 RTL3Q8N8U3 475 aaKnown RBP18.09■□□□□ 0.49
UPF3A-206ENST00000480362 NETO2Q8NC67 525 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 ATL2Q8NHH9 583 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 RIN3Q8TB24 985 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 NKD2Q969F2 451 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-206ENST00000480362 MSLNLQ96KJ4 702 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 RIPOR3Q96MK2 946 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 ZNF148Q9UQR1 794 aa18.09■□□□□ 0.49
UPF3A-206ENST00000480362 ZFP37Q9Y6Q3 630 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-206ENST00000480362 H7C0C1 242 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 RHOXF2BP0C7M4 288 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 TCF3P15923 654 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 SERPINB6P35237 376 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 ATP5OP48047 213 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 DR1Q01658 176 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 NAA30Q147X3 362 aaPredicted RBP18.08■□□□□ 0.48
UPF3A-206ENST00000480362 OASLQ15646 514 aaKnown RBP18.08■□□□□ 0.48
UPF3A-206ENST00000480362 ZNF77Q15935 545 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 GLE1Q53GS7 698 aaKnown RBP18.08■□□□□ 0.48
UPF3A-206ENST00000480362 CCDC70Q6NSX1 233 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 B4GALNT4Q76KP1 1039 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 TP53INP2Q8IXH6 220 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 FAM217AQ8IXS0 508 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 LZTR1Q8N653 840 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 CELF5Q8N6W0 485 aaKnown RBP18.08■□□□□ 0.48
UPF3A-206ENST00000480362 CCDC114Q96M63 670 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 PRICKLE1Q96MT3 831 aaPredicted RBP18.08■□□□□ 0.48
UPF3A-206ENST00000480362 RHOXF2Q9BQY4 288 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 KLC2Q9H0B6 622 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 C10orf88Q9H8K7 445 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 NDFIP2Q9NV92 336 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 TMEM248Q9NWD8 314 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 GDE1Q9NZC3 331 aa18.08■□□□□ 0.48
UPF3A-206ENST00000480362 FEZ2Q9UHY8 353 aaPredicted RBP18.08■□□□□ 0.48
UPF3A-206ENST00000480362 GFRA2O00451 464 aa18.07■□□□□ 0.48
UPF3A-206ENST00000480362 TTI1O43156 1089 aa18.07■□□□□ 0.48
UPF3A-206ENST00000480362 CTIFO43310 598 aaKnown RBP18.07■□□□□ 0.48
UPF3A-206ENST00000480362 CHKAP35790 457 aa18.07■□□□□ 0.48
UPF3A-206ENST00000480362 MTHFRP42898 656 aa18.07■□□□□ 0.48
UPF3A-206ENST00000480362 SGSHP51688 502 aa18.07■□□□□ 0.48
UPF3A-206ENST00000480362 RPS24P62847 133 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms