RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 C14orf80Q86SX3 495 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 MFN1Q8IWA4 741 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 LRRC8AQ8IWT6 810 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 CFAP52Q8N1V2 620 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 FIBINQ8TAL6 211 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 EZH1Q92800 747 aaPredicted RBP20.37■□□□□ 0.85
LIME1-205ENST00000480139 IGSF8Q969P0 613 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 BTBD6Q96KE9 485 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 RETREG1Q9H6L5 497 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 LMAN1LQ9HAT1 526 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 CLEC4EQ9ULY5 219 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 USP18Q9UMW8 372 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 REXO2Q9Y3B8 237 aaKnown RBP20.37■□□□□ 0.85
LIME1-205ENST00000480139 ZDBF2Q9HCK1 2354 aa20.37■□□□□ 0.85
LIME1-205ENST00000480139 BTNL10A8MVZ5 291 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 K7EQS6 105 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 ARHGAP6O43182 974 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 PI15O43692 258 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 CLDN11O75508 207 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 L1CAMP32004 1257 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 GGCXP38435 758 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 VAV2P52735 878 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 CDH4P55283 916 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 ERMARDQ5T6L9 678 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 CYP4V2Q6ZWL3 525 aaPredicted RBP20.36■□□□□ 0.85
LIME1-205ENST00000480139 ANKS1BQ7Z6G8 1248 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 KIAA0907Q7Z7F0 614 aaPredicted RBP20.36■□□□□ 0.85
LIME1-205ENST00000480139 CCDC117Q8IWD4 279 aaPredicted RBP20.36■□□□□ 0.85
LIME1-205ENST00000480139 CCAR2Q8N163 923 aaKnown RBP20.36■□□□□ 0.85
LIME1-205ENST00000480139 TXLNBQ8N3L3 684 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 TMEM105Q8N8V8 129 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 KCNV2Q8TDN2 545 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 PDLIM2Q96JY6 352 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 CALR3Q96L12 384 aaKnown RBP20.36■□□□□ 0.85
LIME1-205ENST00000480139 PEBP4Q96S96 227 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 LRFN3Q9BTN0 628 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 CHRDQ9H2X0 955 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 STIM2Q9P246 746 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 STARD13Q9Y3M8 1113 aa20.36■□□□□ 0.85
LIME1-205ENST00000480139 TBC1D3BA6NDS4 549 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 TRIM24O15164 1050 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 PJA2O43164 708 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 DCNP07585 359 aaKnown RBP20.35■□□□□ 0.85
LIME1-205ENST00000480139 HLA-FP30511 346 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 AVPR2P30518 371 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 HTR7P34969 479 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 NUBP1P53384 320 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 OXCT1P55809 520 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 SEMA3BQ13214 749 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 CDH18Q13634 790 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 EIF4HQ15056 248 aaKnown RBP20.35■□□□□ 0.85
LIME1-205ENST00000480139 MAMSTRQ6ZN01 415 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 ACRBPQ8NEB7 543 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 WFIKKN2Q8TEU8 576 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 LMLNQ96KR4 655 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 ZYG11BQ9C0D3 744 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 RBM12Q9NTZ6 932 aaKnown RBP20.35■□□□□ 0.85
LIME1-205ENST00000480139 PCSK1NQ9UHG2 260 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 AP4E1Q9UPM8 1137 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 NEU3Q9UQ49 428 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 SNX10Q9Y5X0 201 aa20.35■□□□□ 0.85
LIME1-205ENST00000480139 NRDCO43847 1150 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 CHRM1P11229 460 aaPredicted RBP20.34■□□□□ 0.85
LIME1-205ENST00000480139 HOXC13P31276 330 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 ZNF135P52742 658 aaPredicted RBP20.34■□□□□ 0.85
LIME1-205ENST00000480139 SLC25A11Q02978 314 aaKnown RBP20.34■□□□□ 0.85
LIME1-205ENST00000480139 SLC12A1Q13621 1099 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 BOLA3Q53S33 107 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 AHI1Q8N157 1196 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 CARNMT1Q8N4J0 409 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 WFDC5Q8TCV5 224 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 TEKT4Q8WW24 435 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 EPAS1Q99814 870 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 SNRNP25Q9BV90 132 aaKnown RBP20.34■□□□□ 0.85
LIME1-205ENST00000480139 ABCB8Q9NUT2 735 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 GGA2Q9UJY4 613 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 TBC1D30Q9Y2I9 924 aa20.34■□□□□ 0.85
LIME1-205ENST00000480139 CHURC1-FNTBB4DL54 471 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 FAM72CH0Y354 149 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 H0Y626 953 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 TIMM44O43615 452 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 SRGAP2O75044 1071 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 RNF40O75150 1001 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 LRIG2O94898 1065 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 PABPC1P11940 636 aaKnown RBP20.33■□□□□ 0.85
LIME1-205ENST00000480139 IL1R2P27930 398 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 KIR2DL1P43626 348 aaPredicted RBP20.33■□□□□ 0.85
LIME1-205ENST00000480139 IRAK1P51617 712 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 MRPS21P82921 87 aaKnown RBP20.33■□□□□ 0.85
LIME1-205ENST00000480139 DMC1Q14565 340 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 E2F5Q15329 346 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 HADHQ16836 314 aaKnown RBP20.33■□□□□ 0.85
LIME1-205ENST00000480139 GEN1Q17RS7 908 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 HSF5Q4G112 596 aaPredicted RBP20.33■□□□□ 0.85
LIME1-205ENST00000480139 FAM72AQ5TYM5 149 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 DAB2IPQ5VWQ8 1189 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 FAM72DQ6L9T8 149 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 FAM72BQ86X60 149 aa20.33■□□□□ 0.85
LIME1-205ENST00000480139 CIR1Q86X95 450 aaPredicted RBP20.33■□□□□ 0.85
LIME1-205ENST00000480139 TBC1D31Q96DN5 1066 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms