RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 RBM43Q6ZSC3 357 aaKnown RBP15.58■□□□□ 0.08
PRKN-207ENST00000479615 SLC47A2Q86VL8 602 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 CHSY1Q86X52 802 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 SLC41A1Q8IVJ1 513 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 DEFB106AQ8N104 65 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 CARNMT1Q8N4J0 409 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 HDDC3Q8N4P3 179 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 ANKRD20A12PQ8NF67 263 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 LMLNQ96KR4 655 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 PRICKLE1Q96MT3 831 aaPredicted RBP15.58■□□□□ 0.08
PRKN-207ENST00000479615 NUCKS1Q9H1E3 243 aaKnown RBP15.58■□□□□ 0.08
PRKN-207ENST00000479615 CAPN10Q9HC96 672 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 SAMSN1Q9NSI8 373 aaKnown RBP15.58■□□□□ 0.08
PRKN-207ENST00000479615 DDIT4Q9NX09 232 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 STAP1Q9ULZ2 295 aa15.58■□□□□ 0.08
PRKN-207ENST00000479615 A0A1B0GTW7 788 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 TARSL2A2RTX5 802 aaKnown RBP15.57■□□□□ 0.08
PRKN-207ENST00000479615 METTL12A8MUP2 240 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 MEI4A8MW99 385 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 ARHGAP33O14559 1287 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 DAB1O75553 588 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 DNTTP04053 509 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 CYP11B1P15538 503 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 MATKP42679 507 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 RPS24P62847 133 aaKnown RBP15.57■□□□□ 0.08
PRKN-207ENST00000479615 APBA1Q02410 837 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 SLC14A1Q13336 389 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 FKBP15Q5T1M5 1219 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 RNF219Q5W0B1 726 aaPredicted RBP15.57■□□□□ 0.08
PRKN-207ENST00000479615 SASS6Q6UVJ0 657 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 OLFML1Q6UWY5 402 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 SND1Q7KZF4 910 aaKnown RBP eCLIP15.57■□□□□ 0.08
PRKN-207ENST00000479615 ZNF677Q86XU0 584 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 PASD1Q8IV76 773 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 LGI2Q8N0V4 545 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 CYB5D2Q8WUJ1 264 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 GPR174Q9BXC1 333 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 SLC6A17Q9H1V8 727 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 SGK2Q9HBY8 427 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 ANO10Q9NW15 660 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 NCKAP1Q9Y2A7 1128 aa15.57■□□□□ 0.08
PRKN-207ENST00000479615 A0A1B0GVM2 712 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 TCAF2A6NFQ2 919 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 OPHN1O60890 802 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 HLA-EP13747 358 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 CSKP41240 450 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 GABRB2P47870 512 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 VASPP50552 380 aaPredicted RBP15.56■□□□□ 0.08
PRKN-207ENST00000479615 NOVA1P51513 510 aaKnown RBP15.56■□□□□ 0.08
PRKN-207ENST00000479615 PLK1P53350 603 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 ECT2LQ008S8 904 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 KCNMA1Q12791 1236 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 TAF5Q15542 800 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 HNRNPA1L2Q32P51 320 aaKnown RBP15.56■□□□□ 0.08
PRKN-207ENST00000479615 PLEKHG6Q3KR16 790 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 PITRM1Q5JRX3 1037 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 BRMS1LQ5PSV4 323 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 RAP1GAP2Q684P5 730 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 ZNF776Q68DI1 518 aaPredicted RBP15.56■□□□□ 0.08
PRKN-207ENST00000479615 DPY19L2P1Q6NXN4 242 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 IL27RAQ6UWB1 636 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 FAM183BPQ6ZVS7 135 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 USP30Q70CQ3 517 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 DEFB119Q8N690 84 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 C18orf8Q96DM3 657 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 PGAP3Q96FM1 320 aaPredicted RBP15.56■□□□□ 0.08
PRKN-207ENST00000479615 PRMT1Q99873 361 aaKnown RBP15.56■□□□□ 0.08
PRKN-207ENST00000479615 NAA15Q9BXJ9 866 aaKnown RBP15.56■□□□□ 0.08
PRKN-207ENST00000479615 BTBD1Q9H0C5 482 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 PRSS16Q9NQE7 514 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 ANGPTL2Q9UKU9 493 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 TPX2Q9ULW0 747 aaKnown RBP15.56■□□□□ 0.08
PRKN-207ENST00000479615 NUP205Q92621 2012 aa15.56■□□□□ 0.08
PRKN-207ENST00000479615 MBD3O95983 291 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 ERBB2P04626 1255 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 KCNA4P22459 653 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 MAPK8P45983 427 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 SHC2P98077 582 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 UAP1L1Q3KQV9 507 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 PTPN20Q4JDL3 420 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 N4BP2L1Q5TBK1 243 aaPredicted RBP15.55■□□□□ 0.08
PRKN-207ENST00000479615 SH3PXD2AQ5TCZ1 1133 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 CDKAL1Q5VV42 579 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 PSAPL1Q6NUJ1 521 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 LRSAM1Q6UWE0 723 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 ARCQ7LC44 396 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 ERICH1Q86X53 443 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 CFAP52Q8N1V2 620 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 WFDC5Q8TCV5 224 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 ERLEC1Q96DZ1 483 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 RSPH9Q9H1X1 276 aaPredicted RBP15.55■□□□□ 0.08
PRKN-207ENST00000479615 OSGEPQ9NPF4 335 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 DNAAF2Q9NVR5 837 aaKnown RBP15.55■□□□□ 0.08
PRKN-207ENST00000479615 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.55■□□□□ 0.083e-11■■■■■ 81.1
PRKN-207ENST00000479615 ERVW-1Q9UQF0 538 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 FHOD1Q9Y613 1164 aa15.55■□□□□ 0.08
PRKN-207ENST00000479615 CNOT1A5YKK6 2376 aaKnown RBP15.54■□□□□ 0.08
PRKN-207ENST00000479615 SPTBN2O15020 2390 aa15.54■□□□□ 0.08
PRKN-207ENST00000479615 ITIH6Q6UXX5 1313 aa15.54■□□□□ 0.08
PRKN-207ENST00000479615 ATXN2Q99700 1313 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms