RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 BPTFQ12830 3046 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 TLR4O00206 839 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 XPO1O14980 1071 aaKnown RBP16.72■□□□□ 0.27
DDX56-210ENST00000479440 MAGEC1O60732 1142 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 ADH1BP00325 375 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 TRIM49P0CI25 452 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 TRIM49CP0CI26 452 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 KRT13P13646 458 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 GCLMP48507 274 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 SLC11A2P49281 568 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 ADPRHP54922 357 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 C1orf220Q5T0J3 134 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 NAPEPLDQ6IQ20 393 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 SND1Q7KZF4 910 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX56-210ENST00000479440 BHLHA9Q7RTU4 235 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 MMAAQ8IVH4 418 aaKnown RBP16.72■□□□□ 0.27
DDX56-210ENST00000479440 CCDC117Q8IWD4 279 aaPredicted RBP16.72■□□□□ 0.27
DDX56-210ENST00000479440 SIX6OS1Q8N1H7 587 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 WFDC5Q8TCV5 224 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 TTC17Q96AE7 1141 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 MYO19Q96H55 970 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 MTG2Q9H4K7 406 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 MMRN2Q9H8L6 949 aa16.72■□□□□ 0.27
DDX56-210ENST00000479440 TARSL2A2RTX5 802 aaKnown RBP16.71■□□□□ 0.27
DDX56-210ENST00000479440 MSI1O43347 362 aaKnown RBP16.71■□□□□ 0.27
DDX56-210ENST00000479440 PSMD8P48556 350 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 E2F1Q01094 437 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 ENPEPQ07075 957 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 ADIGQ0VDE8 80 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 BNIP3Q12983 259 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 STK4Q13043 487 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 ARID5BQ14865 1188 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 HS1BP3Q53T59 392 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 PIK3R6Q5UE93 754 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 NUGGCQ68CJ6 796 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 KDM7AQ6ZMT4 941 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 IQCHQ86VS3 1027 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 UNC45BQ8IWX7 931 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 MFSD2AQ8NA29 543 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 SLC4A11Q8NBS3 891 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 HJURPQ8NCD3 748 aaPredicted RBP16.71■□□□□ 0.27
DDX56-210ENST00000479440 OR14C36Q8NHC7 312 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 EDEM1Q92611 657 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 ZNF578Q96N58 590 aaPredicted RBP16.71■□□□□ 0.27
DDX56-210ENST00000479440 TMEM8AQ9HCN3 771 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 CISHQ9NSE2 258 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 ABCC13Q9NSE7 274 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 CABIN1Q9Y6J0 2220 aa16.71■□□□□ 0.27
DDX56-210ENST00000479440 ASXL3Q9C0F0 2248 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 KALRNO60229 2985 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 EDDM13A0A1B0GTR0 161 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 C10orf142B7Z368 130 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 SRPRAP08240 638 aaKnown RBP16.7■□□□□ 0.26
DDX56-210ENST00000479440 GOT1P17174 413 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 C5AR1P21730 350 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 SLC8A1P32418 973 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 NUDT1P36639 197 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 CSKP41240 450 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 PPP3CAQ08209 521 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 BST2Q10589 180 aaKnown RBP16.7■□□□□ 0.26
DDX56-210ENST00000479440 CDH18Q13634 790 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 KCNJ12Q14500 433 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 GOLGA7BQ2TAP0 167 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 PKDCCQ504Y2 493 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 BSPRYQ5W0U4 402 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 RFWD3Q6PCD5 774 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 FIBINQ8TAL6 211 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 DDX50Q9BQ39 737 aaKnown RBP16.7■□□□□ 0.26
DDX56-210ENST00000479440 CLMPQ9H6B4 373 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 STIM2Q9P246 746 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 HESX1Q9UBX0 185 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 ITIH6Q6UXX5 1313 aa16.7■□□□□ 0.26
DDX56-210ENST00000479440 WNT9AO14904 365 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 KLRC4O43908 158 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 MOCS3O95396 460 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 MT-CO3P00414 261 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 PDIA4P13667 645 aaKnown RBP16.69■□□□□ 0.26
DDX56-210ENST00000479440 NR2F2P24468 414 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 RAD23BP54727 409 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 DAB2P98082 770 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 OVGP1Q12889 678 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 PROX2Q3B8N5 592 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 C9orf64Q5T6V5 341 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 RNF219Q5W0B1 726 aaPredicted RBP16.69■□□□□ 0.26
DDX56-210ENST00000479440 KRT39Q6A163 491 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 MSANTD2Q6P1R3 559 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 KANSL1Q7Z3B3 1105 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 PRPF39Q86UA1 669 aaKnown RBP16.69■□□□□ 0.26
DDX56-210ENST00000479440 FAM186BQ8IYM0 893 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 GRAMD1CQ8IYS0 662 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 LSMEM2Q8N112 164 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 AADATQ8N5Z0 425 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 NDRG1Q92597 394 aaKnown RBP16.69■□□□□ 0.26
DDX56-210ENST00000479440 NAF1Q96HR8 494 aaKnown RBP16.69■□□□□ 0.26
DDX56-210ENST00000479440 INTS4Q96HW7 963 aaKnown RBP16.69■□□□□ 0.26
DDX56-210ENST00000479440 MRGPRX3Q96LB0 322 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 PRICKLE1Q96MT3 831 aaPredicted RBP16.69■□□□□ 0.26
DDX56-210ENST00000479440 TSPAN16Q9UKR8 245 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 TRAF3IP3Q9Y228 551 aa16.69■□□□□ 0.26
DDX56-210ENST00000479440 CEP83Q9Y592 693 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms