RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 HADHBP55084 474 aaKnown RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 MARCH8Q5T0T0 291 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 AGBL2Q5U5Z8 902 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 LRRC57Q8N9N7 239 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 ULK4Q96C45 1275 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 POLR1EQ9GZS1 481 aaKnown RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 KIAA1551Q9HCM1 1747 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 TRIM49D1C9J1S8 452 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 ADAMTS4O75173 837 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 C8AP07357 584 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 PARP6Q2NL67 630 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 MMEL1Q495T6 779 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 TPGS2Q68CL5 300 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 FAM43BQ6ZT52 329 aaPredicted RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 HJURPQ8NCD3 748 aaPredicted RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 KREMEN2Q8NCW0 462 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 MCRS1Q96EZ8 462 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 PCMTD2Q9NV79 361 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 LUC7L3O95232 432 aaKnown RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 GFAPP14136 432 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 RCN2Q14257 317 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 POU6F1Q14863 301 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 C1orf220Q5T0J3 134 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 GPR158Q5T848 1215 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 ZNF280BQ86YH2 543 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 SDCBP2Q9H190 292 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 RCOR3Q9P2K3 495 aaPredicted RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 SLC39A10Q9ULF5 831 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 SMIM24O75264 130 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 ELK3P41970 407 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 CDK16Q00536 496 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 ANKRD20A2Q5SQ80 823 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 ANKRD20A1Q5TYW2 823 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 TTC39BQ5VTQ0 682 aaPredicted RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 TMEM110Q86TL2 294 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 OSTM1Q86WC4 334 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 PSTKQ8IV42 348 aaKnown RBP12.32□□□□□ -0.44
PCCB-214ENST00000478469 SCAMP5Q8TAC9 235 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 ARNTL2Q8WYA1 636 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 SLC4A5Q9BY07 1137 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 GTSE1Q9NYZ3 720 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 MPP6Q9NZW5 540 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 RAB21Q9UL25 225 aa12.32□□□□□ -0.44
PCCB-214ENST00000478469 COL4A5P29400 1685 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 A0A0G2JND7 137 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 MAGEB16A2A368 324 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 FAM47DPA6NHR8 397 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 ERI2A8K979 691 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 TRDMT1O14717 391 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 SYNCRIPO60506 623 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 ITGAVP06756 1048 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 CHRM3P20309 590 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 TDRD5Q8NAT2 981 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 PBXIP1Q96AQ6 731 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 THOC1Q96FV9 657 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 SGSM3Q96HU1 749 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 CSPG4P5Q96PW8 444 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 TGS1Q96RS0 853 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 ELAC1Q9H777 363 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 G3BP2Q9UN86 482 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 PRRC2BQ5JSZ5 2229 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 PHIPQ8WWQ0 1821 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 LZTS3O60299 673 aaPredicted RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 TBL1XO60907 577 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 FGF19O95750 216 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 IGSF6O95976 241 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 TPH1P17752 444 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 RGS4P49798 205 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 RABGGTBP53611 331 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 SOX4Q06945 474 aaPredicted RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 LPCAT1Q8NF37 534 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 LGMNQ99538 433 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 FUT8Q9BYC5 575 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 HAPLN2Q9GZV7 340 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 TNS1Q9HBL0 1735 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 CCDC195A0A1B0GUA6 201 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 CCL16O15467 120 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 SOAT2O75908 522 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 CCNB1P14635 433 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 HDAC4P56524 1084 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 C15orf39Q6ZRI6 1047 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 TAC4Q86UU9 113 aa12.31□□□□□ -0.44
PCCB-214ENST00000478469 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCCB-214ENST00000478469 UPF3AQ9H1J1 476 aaKnown RBP12.31□□□□□ -0.44
PCCB-214ENST00000478469 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
PCCB-214ENST00000478469 ZBTB42B2RXF5 422 aa12.3□□□□□ -0.44
PCCB-214ENST00000478469 DDX3YO15523 660 aaKnown RBP12.3□□□□□ -0.44
PCCB-214ENST00000478469 USP12O75317 370 aa12.3□□□□□ -0.44
PCCB-214ENST00000478469 GALTP07902 379 aa12.3□□□□□ -0.44
PCCB-214ENST00000478469 CFHP08603 1231 aa12.3□□□□□ -0.44
PCCB-214ENST00000478469 POLR2EP19388 210 aaKnown RBP12.3□□□□□ -0.44
PCCB-214ENST00000478469 RPL22P35268 128 aaKnown RBP12.3□□□□□ -0.44
PCCB-214ENST00000478469 GATMP50440 423 aa12.3□□□□□ -0.44
PCCB-214ENST00000478469 SFSWAPQ12872 951 aaKnown RBP12.3□□□□□ -0.44
PCCB-214ENST00000478469 SLC12A1Q13621 1099 aa12.3□□□□□ -0.44
PCCB-214ENST00000478469 AARS2Q5JTZ9 985 aaKnown RBP12.3□□□□□ -0.44
PCCB-214ENST00000478469 CAVIN3Q969G5 261 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms