RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 MYO19Q96H55 970 aa22.5■■□□□ 1.19
COL9A3-211ENST00000477612 NAT10Q9H0A0 1025 aaKnown RBP22.5■■□□□ 1.19
COL9A3-211ENST00000477612 NLRC4Q9NPP4 1024 aa22.5■■□□□ 1.19
COL9A3-211ENST00000477612 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.5■■□□□ 1.19
COL9A3-211ENST00000477612 KIAA1522Q9P206 1035 aaPredicted RBP22.5■■□□□ 1.19
COL9A3-211ENST00000477612 EVLQ9UI08 416 aaPredicted RBP22.5■■□□□ 1.19
COL9A3-211ENST00000477612 CYP8B1Q9UNU6 501 aa22.5■■□□□ 1.19
COL9A3-211ENST00000477612 F5H5T6 163 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 M0QYT0 321 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 TM4SF5O14894 197 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 ASLP04424 464 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 HOXD12P35452 270 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 STAT1P42224 750 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 CDR2Q01850 454 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 RPL6Q02878 288 aaKnown RBP22.49■■□□□ 1.19
COL9A3-211ENST00000477612 UBXN1Q04323 297 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 C5orf22Q49AR2 442 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 TTC39BQ5VTQ0 682 aaPredicted RBP22.49■■□□□ 1.19
COL9A3-211ENST00000477612 CARNMT1Q8N4J0 409 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 MSANTD4Q8NCY6 345 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 OR2T3Q8NH03 318 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 ERLEC1Q96DZ1 483 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 SIPA1Q96FS4 1042 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 ZNF419Q96HQ0 510 aaPredicted RBP22.49■■□□□ 1.19
COL9A3-211ENST00000477612 ADAM33Q9BZ11 813 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 FBRSQ9HAH7 460 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 CD93Q9NPY3 652 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 TMEM74BQ9NUR3 256 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 WSB2Q9NYS7 404 aaPredicted RBP22.49■■□□□ 1.19
COL9A3-211ENST00000477612 SUN2Q9UH99 717 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 TMEM59LQ9UK28 342 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 PILRBQ9UKJ0 227 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 STAP1Q9ULZ2 295 aa22.49■■□□□ 1.19
COL9A3-211ENST00000477612 NYNRINQ9P2P1 1898 aaKnown RBP22.49■■□□□ 1.19
COL9A3-211ENST00000477612 F9P00740 461 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 HLA-EP13747 358 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 CHRNB2P17787 502 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 CXCR3P49682 368 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 FMO1Q01740 532 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 ZNF33AQ06730 810 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 SLC12A1Q13621 1099 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 CDH18Q13634 790 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 ARID5BQ14865 1188 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 ANO6Q4KMQ2 910 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 FNDC3BQ53EP0 1204 aaKnown RBP22.48■■□□□ 1.19
COL9A3-211ENST00000477612 LYSMD4Q5XG99 296 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 TCEAL6Q6IPX3 200 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 KIAA1324Q6UXG2 1013 aaKnown RBP22.48■■□□□ 1.19
COL9A3-211ENST00000477612 BNIPLQ7Z465 357 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 CCDC117Q8IWD4 279 aaPredicted RBP22.48■■□□□ 1.19
COL9A3-211ENST00000477612 AOPEPQ8N6M6 819 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 NEK11Q8NG66 645 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 SLC20A1Q8WUM9 679 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 PIGKQ92643 395 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 PRCCQ92733 491 aaPredicted RBP22.48■■□□□ 1.19
COL9A3-211ENST00000477612 TCEAL3Q969E4 200 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 SPAG5Q96R06 1193 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 ARHGEF38Q9NXL2 777 aa22.48■■□□□ 1.19
COL9A3-211ENST00000477612 SYNJ2BP-COX16A0A087WUM0 186 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 H0Y626 953 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 KHNYNO15037 678 aaKnown RBP22.47■■□□□ 1.19
COL9A3-211ENST00000477612 CD6P30203 668 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 CSKP41240 450 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 PLK1P53350 603 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 NME3Q13232 169 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 SLC25A52Q3SY17 297 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 BRMS1LQ5PSV4 323 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 FAM102AQ5T9C2 384 aaPredicted RBP22.47■■□□□ 1.19
COL9A3-211ENST00000477612 STPG1Q5TH74 334 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 FBXL22Q6P050 247 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 TRIM72Q6ZMU5 477 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 SLC41A1Q8IVJ1 513 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 CCAR2Q8N163 923 aaKnown RBP22.47■■□□□ 1.19
COL9A3-211ENST00000477612 CPA5Q8WXQ8 436 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 RNF34Q969K3 372 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 MRGPRX3Q96LB0 322 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 PIGVQ9NUD9 493 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 COX16Q9P0S2 106 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 HS3ST4Q9Y661 456 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 ADAMTS9Q9P2N4 1935 aa22.47■■□□□ 1.19
COL9A3-211ENST00000477612 A0A1B0GVM2 712 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 LNP1A1A4G5 178 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 TCAF2A6NFQ2 919 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 PATE3B3GLJ2 98 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 SRPRAP08240 638 aaKnown RBP22.46■■□□□ 1.19
COL9A3-211ENST00000477612 UNGP13051 313 aaPredicted RBP22.46■■□□□ 1.19
COL9A3-211ENST00000477612 ATP1A3P13637 1013 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 TFE3P19532 575 aaPredicted RBP22.46■■□□□ 1.19
COL9A3-211ENST00000477612 MMP8P22894 467 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 ITPKAP23677 461 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 OXTRP30559 389 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 TPMTP51580 245 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 AUHQ13825 339 aaKnown RBP22.46■■□□□ 1.19
COL9A3-211ENST00000477612 PLEKHG6Q3KR16 790 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 PITRM1Q5JRX3 1037 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 RABGAP1LQ5R372 815 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 NAA35Q5VZE5 725 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 SLC23A3Q6PIS1 610 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 MMS22LQ6ZRQ5 1243 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 DHX40Q8IX18 779 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms