RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RHOT1Q8IXI2 618 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 CCAR2Q8N163 923 aaKnown RBP15.82■□□□□ 0.12
SEC13-215ENST00000477547 PYROXD2Q8N2H3 581 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 MYEOVQ96EZ4 313 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 EPAS1Q99814 870 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 OSBPL2Q9H1P3 480 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 SLC2A4RGQ9NR83 387 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 MARK1Q9P0L2 795 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 OR12D3Q9UGF7 316 aa15.82■□□□□ 0.12
SEC13-215ENST00000477547 OTOL1A6NHN0 477 aaPredicted RBP15.81■□□□□ 0.12
SEC13-215ENST00000477547 HOXC11O43248 304 aaPredicted RBP15.81■□□□□ 0.12
SEC13-215ENST00000477547 TBL1XO60907 577 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 LRIG2O94898 1065 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 HOXD9P28356 352 aaPredicted RBP15.81■□□□□ 0.12
SEC13-215ENST00000477547 ID4P47928 161 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 MARCKSL1P49006 195 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 IRAK1P51617 712 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 MLLT6P55198 1093 aaPredicted RBP15.81■□□□□ 0.12
SEC13-215ENST00000477547 RPS24P62847 133 aaKnown RBP15.81■□□□□ 0.12
SEC13-215ENST00000477547 NRG1Q02297 640 aaPredicted RBP15.81■□□□□ 0.12
SEC13-215ENST00000477547 NR1H3Q13133 447 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 KRT81Q14533 505 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 DPYSL2Q16555 572 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 BOLA3Q53S33 107 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 HS1BP3Q53T59 392 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 PPP6R3Q5H9R7 873 aaPredicted RBP15.81■□□□□ 0.12
SEC13-215ENST00000477547 MANEALQ5VSG8 457 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 FBXL22Q6P050 247 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 RHBDF2Q6PJF5 856 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 LRRC31Q6UY01 552 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 ERMP1Q7Z2K6 904 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 PEX26Q7Z412 305 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 C14orf80Q86SX3 495 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 ADGRG2Q8IZP9 1017 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 CFAP52Q8N1V2 620 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 TMEM105Q8N8V8 129 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 DDI1Q8WTU0 396 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 TBC1D31Q96DN5 1066 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 C1orf74Q96LT6 269 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 KCTD15Q96SI1 283 aaPredicted RBP15.81■□□□□ 0.12
SEC13-215ENST00000477547 MAGEB5Q9BZ81 275 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 IRX2Q9BZI1 471 aaPredicted RBP15.81■□□□□ 0.12
SEC13-215ENST00000477547 TRPV5Q9NQA5 729 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 PLK2Q9NYY3 685 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 NEU3Q9UQ49 428 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 SHROOM3Q8TF72 1996 aa15.81■□□□□ 0.12
SEC13-215ENST00000477547 FAM72CH0Y354 149 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 CREB3O43889 395 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 SRGAP2O75044 1071 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 PENKP01210 267 aaPredicted RBP15.8■□□□□ 0.12
SEC13-215ENST00000477547 TYRP14679 529 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 L1CAMP32004 1257 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 NBL1P41271 181 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 SOX9P48436 509 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 CDH6P55285 790 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 TPI1P60174 286 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 GAD2Q05329 585 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 SEMA3BQ13214 749 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 FAM72AQ5TYM5 149 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 LRRC38Q5VT99 294 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 FYB2Q5VWT5 728 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 FAM72DQ6L9T8 149 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 NT5DC3Q86UY8 548 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 FAM72BQ86X60 149 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 ZNF683Q8IZ20 524 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 C17orf53Q8N3J3 647 aaPredicted RBP15.8■□□□□ 0.12
SEC13-215ENST00000477547 TRIM58Q8NG06 486 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 IGSF8Q969P0 613 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 TMA16Q96EY4 203 aaKnown RBP15.8■□□□□ 0.12
SEC13-215ENST00000477547 P2RY11Q96G91 374 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 HEBP1Q9NRV9 189 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 STIM2Q9P246 746 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 PIAS3Q9Y6X2 628 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 NUP205Q92621 2012 aa15.8■□□□□ 0.12
SEC13-215ENST00000477547 MUC22E2RYF6 1773 aaPredicted RBP15.79■□□□□ 0.12
SEC13-215ENST00000477547 F5P12259 2224 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 IGLV3-10A0A075B6K4 115 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 A0A1B0GVM2 712 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 LRRD1A4D1F6 860 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 TCAF2A6NFQ2 919 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 H3BRJ5 948 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 EEF2KO00418 725 aaKnown RBP15.79■□□□□ 0.12
SEC13-215ENST00000477547 CACNG3O60359 315 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 GJA4P35212 333 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 CTNNA1P35221 906 aaKnown RBP15.79■□□□□ 0.12
SEC13-215ENST00000477547 ARL4AP40617 200 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 CDH18Q13634 790 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 GAB4Q2WGN9 574 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 ATP13A4Q4VNC1 1196 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 RWDD4Q6NW29 188 aaKnown RBP15.79■□□□□ 0.12
SEC13-215ENST00000477547 UBALD2Q8IYN6 164 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 KRT35Q92764 455 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 CD101Q93033 1021 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 CALN1Q9BXU9 219 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 ZYG11BQ9C0D3 744 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 PCDH18Q9HCL0 1135 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 DDX56Q9NY93 547 aaKnown RBP15.79■□□□□ 0.12
SEC13-215ENST00000477547 FBXL21Q9UKT6 434 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 AMFRQ9UKV5 643 aa15.79■□□□□ 0.12
SEC13-215ENST00000477547 PACSIN2Q9UNF0 486 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms