RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 IGLV3-10A0A075B6K4 115 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 CFAP69A5D8W1 941 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 C5orf60A6NFR6 353 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 HACD1B0YJ81 288 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 GCATO75600 419 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 CNTN5O94779 1100 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 METTL18O95568 372 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 GLUD1P00367 558 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 WASHC5Q12768 1159 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 PDK1Q15118 436 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 ALFQ53S48 1182 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 RAP1GAP2Q684P5 730 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 TXNDC8Q6A555 127 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 BZW1Q7L1Q6 419 aaKnown RBP14.87□□□□□ -0.03
COL4A6-206ENST00000477085 ATP6V0D2Q8N8Y2 350 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 BBOF1Q8ND07 529 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 HTR3CQ8WXA8 447 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 PRCCQ92733 491 aaPredicted RBP14.87□□□□□ -0.03
COL4A6-206ENST00000477085 LRRC45Q96CN5 670 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 SEMA4AQ9H3S1 761 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 NOL6Q9H6R4 1146 aaKnown RBP14.87□□□□□ -0.03
COL4A6-206ENST00000477085 CERS4Q9HA82 394 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 ZNF212Q9UDV6 495 aa14.87□□□□□ -0.03
COL4A6-206ENST00000477085 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.86□□□□□ -0.03
COL4A6-206ENST00000477085 DRGXA6NNA5 263 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 H0YGN5 161 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 CLASP2O75122 1294 aaKnown RBP14.86□□□□□ -0.03
COL4A6-206ENST00000477085 RFPL2O75678 378 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 STC2O76061 302 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 TMEM63AO94886 807 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 SLC6A4P31645 630 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 HTR7P34969 479 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 PPP3CCP48454 512 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 KPNA1P52294 538 aaPredicted RBP14.86□□□□□ -0.03
COL4A6-206ENST00000477085 ERVK-21P61565 698 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 CAV1Q03135 178 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 AP1B1Q10567 949 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 FAM133BQ5BKY9 247 aaKnown RBP14.86□□□□□ -0.03
COL4A6-206ENST00000477085 SYCP2LQ5T4T6 812 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 AFMIDQ63HM1 303 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 ARHGAP36Q6ZRI8 547 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 ITIH5Q86UX2 942 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 ZCCHC9Q8N567 271 aaKnown RBP14.86□□□□□ -0.03
COL4A6-206ENST00000477085 CCNYQ8ND76 341 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 ZSCAN18Q8TBC5 510 aaPredicted RBP14.86□□□□□ -0.03
COL4A6-206ENST00000477085 ADAMTS19Q8TE59 1207 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 ZIM3Q96PE6 472 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 CEP41Q9BYV8 373 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 SLC39A8Q9C0K1 460 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 LRRC4CQ9HCJ2 640 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 HCFC1R1Q9NWW0 138 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 MTRF1LQ9UGC7 380 aaKnown RBP14.86□□□□□ -0.03
COL4A6-206ENST00000477085 ASB3Q9Y575 518 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 RAD54BQ9Y620 910 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 NFS1Q9Y697 457 aa14.86□□□□□ -0.03
COL4A6-206ENST00000477085 SPDYE4A6NLX3 237 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 WASH4PA8MWX3 477 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 GOLGA8MH3BSY2 632 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 PER2O15055 1255 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 CCL16O15467 120 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 FGF10O15520 208 aaPredicted RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 LRG1P02750 347 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 EPCAMP16422 314 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 GJA1P17302 382 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 GABRR2P28476 465 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 GARSP41250 739 aaKnown RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 CCR2P41597 374 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 PMS2P54278 862 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 CYP4F8P98187 520 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 PPIDQ08752 370 aaKnown RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 MORF4L2Q15014 288 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 FAXCQ5TGI0 409 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 HEATR6Q6AI08 1181 aaKnown RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 CCDC149Q6ZUS6 474 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 TADA2BQ86TJ2 420 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 CCDC25Q86WR0 208 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 CIR1Q86X95 450 aaPredicted RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 RTL3Q8N8U3 475 aaKnown RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 TGS1Q96RS0 853 aaKnown RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 PBX4Q9BYU1 374 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 NACA2Q9H009 215 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 PAK5Q9P286 719 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 PPARGC1AQ9UBK2 798 aaKnown RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 UXTQ9UBK9 157 aaPredicted RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 SLC12A6Q9UHW9 1150 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 PCDHA11Q9Y5I1 949 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 GBF1Q92538 1859 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 H3BNC9 293 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 H3BQF6 201 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 KCNK1O00180 336 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 PPP1R12AO14974 1030 aaPredicted RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 ACSL4O60488 711 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 GREM1O60565 184 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 OLFM2O95897 454 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 SYF2O95926 243 aaKnown RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 KCNJ11Q14654 390 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 ANKRD20A2Q5SQ80 823 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 STXBP5Q5T5C0 1151 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 ANKRD20A1Q5TYW2 823 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 ANKRD20A3Q5VUR7 823 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms