RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 GNSP15586 552 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 EEF1GP26641 437 aaKnown RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 CCR1P32246 355 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 ANP32AP39687 249 aaKnown RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 CSKP41240 450 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 ATXN3P54252 364 aaPredicted RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 SNX16P57768 344 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 ST8SIA6P61647 398 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 RPS14P62263 151 aaKnown RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 SLC6A3Q01959 620 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 ZBTB16Q05516 673 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 SEMA3BQ13214 749 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 KCNJ12Q14500 433 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 ARID5BQ14865 1188 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 DRAP1Q14919 205 aaPredicted RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 TCP11X2Q5H9J9 407 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 OR6B2Q6IFH4 312 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 MMS22LQ6ZRQ5 1243 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 FAM183BPQ6ZVS7 135 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 ZNF397Q8NF99 534 aaPredicted RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 ENOX1Q8TC92 643 aaKnown RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 GTPBP2Q9BX10 602 aaKnown RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 KIAA1522Q9P206 1035 aaPredicted RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 FRYQ5TBA9 3013 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 ASPMQ8IZT6 3477 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 A0A1B0GTW7 788 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 F5H5T6 163 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 H0Y626 953 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 OPHN1O60890 802 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 GRAP2O75791 330 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 MOCS3O95396 460 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 SRPRAP08240 638 aaKnown RBP11.16□□□□□ -0.62
SEC13-214ENST00000476597 UCHL3P15374 230 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 CYP11B1P15538 503 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 ABCB4P21439 1286 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 ACSL1P33121 698 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 CDH5P33151 784 aaPredicted RBP11.16□□□□□ -0.62
SEC13-214ENST00000476597 NOS2P35228 1153 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 GABRB2P47870 512 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 SHC2P98077 582 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 CDH18Q13634 790 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 HNRNPA1L2Q32P51 320 aaKnown RBP11.16□□□□□ -0.62
SEC13-214ENST00000476597 PLEKHG6Q3KR16 790 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 PTPN20Q4JDL3 420 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 PITRM1Q5JRX3 1037 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 DCAF12L1Q5VU92 463 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
SEC13-214ENST00000476597 SLC26A9Q7LBE3 791 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 PIP4P1Q86T03 277 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 FAM124AQ86V42 546 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 CHSY1Q86X52 802 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 CACUL1Q86Y37 369 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 ZDHHC17Q8IUH5 632 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 DEFB124Q8NES8 71 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 C1orf216Q8TAB5 229 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 STK33Q9BYT3 514 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 PCED1AQ9H1Q7 454 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 RSPH9Q9H1X1 276 aaPredicted RBP11.16□□□□□ -0.62
SEC13-214ENST00000476597 MTG2Q9H4K7 406 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 FAM204AQ9H8W3 233 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 PLCB1Q9NQ66 1216 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 DNAAF2Q9NVR5 837 aaKnown RBP11.16□□□□□ -0.62
SEC13-214ENST00000476597 DDIT4Q9NX09 232 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 ANGPTL2Q9UKU9 493 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 ERVW-1Q9UQF0 538 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 FHOD1Q9Y613 1164 aa11.16□□□□□ -0.62
SEC13-214ENST00000476597 KMT2BQ9UMN6 2715 aaPredicted RBP11.15□□□□□ -0.62
SEC13-214ENST00000476597 SYNJ2BP-COX16A0A087WUM0 186 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 TARSL2A2RTX5 802 aaKnown RBP11.15□□□□□ -0.62
SEC13-214ENST00000476597 MEI4A8MW99 385 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 SIN3BO75182 1162 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 GJB3O75712 270 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 DNTTP04053 509 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 CD59P13987 128 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 CTSOP43234 321 aaPredicted RBP11.15□□□□□ -0.62
SEC13-214ENST00000476597 PLK1P53350 603 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 ECT2LQ008S8 904 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 MTA1Q13330 715 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 SLC12A1Q13621 1099 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 AUHQ13825 339 aaKnown RBP11.15□□□□□ -0.62
SEC13-214ENST00000476597 RAPGEF1Q13905 1077 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 C9orf64Q5T6V5 341 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 FBXL22Q6P050 247 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 APCDD1Q8J025 514 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 CCAR2Q8N163 923 aaKnown RBP11.15□□□□□ -0.62
SEC13-214ENST00000476597 HDDC3Q8N4P3 179 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 MINDY1Q8N5J2 469 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 TMEM35BQ8NCS4 154 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 GPT2Q8TD30 523 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 RNF34Q969K3 372 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 IGSF8Q969P0 613 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 NT5C3BQ969T7 300 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 C18orf8Q96DM3 657 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 ZDHHC5Q9C0B5 715 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 BTBD1Q9H0C5 482 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 PDCL3Q9H2J4 239 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 SLC32A1Q9H598 525 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 C6orf106Q9H6K1 298 aaPredicted RBP11.15□□□□□ -0.62
SEC13-214ENST00000476597 SYNCQ9H7C4 482 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 RRN3Q9NYV6 651 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms