RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ZBTB16Q05516 673 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 DEUP1Q05D60 604 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 LMAN2Q12907 356 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 KLHL40Q2TBA0 621 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 MAP7D1Q3KQU3 841 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 ARL13BQ3SXY8 428 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 SLC25A52Q3SY17 297 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 FUT11Q495W5 492 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 WDR45BQ5MNZ6 344 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 NADSYN1Q6IA69 706 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 KIAA1211LQ6NV74 962 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 ARCQ7LC44 396 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 KIAA0907Q7Z7F0 614 aaPredicted RBP10.56□□□□□ -0.72
CCM2-208ENST00000476594 NOP9Q86U38 636 aaKnown RBP10.56□□□□□ -0.72
CCM2-208ENST00000476594 XYLT1Q86Y38 959 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 TMPRSS6Q8IU80 811 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 SYT12Q8IV01 421 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 OR2T3Q8NH03 318 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 RLN3Q8WXF3 142 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 PIGKQ92643 395 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 PGAP3Q96FM1 320 aaPredicted RBP10.56□□□□□ -0.72
CCM2-208ENST00000476594 MRGPRX1Q96LB2 322 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 PRICKLE1Q96MT3 831 aaPredicted RBP10.56□□□□□ -0.72
CCM2-208ENST00000476594 SEPT11Q9NVA2 429 aaKnown RBP10.56□□□□□ -0.72
CCM2-208ENST00000476594 MYO6Q9UM54 1294 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 SCML1Q9UN30 329 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 CYP8B1Q9UNU6 501 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 SIK3Q9Y2K2 1263 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 SDK1Q7Z5N4 2213 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.55□□□□□ -0.72
CCM2-208ENST00000476594 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 IGHV1OR15-9A0A0B4J2B8 117 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 ANTXRLA6NF34 631 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 WASH3PC4AMC7 463 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 GOLGA6L19H0YKK7 550 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 GOLGA8SH3BPF8 625 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 SLC30A4O14863 429 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 CLDN11O75508 207 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 CALB1P05937 261 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 MMEP08473 750 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 BCKDHBP21953 392 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 CD6P30203 668 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 SDC4P31431 198 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 CD70P32970 193 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 ATXN3P54252 364 aaPredicted RBP10.55□□□□□ -0.72
CCM2-208ENST00000476594 JAM2P57087 298 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 RPS24P62847 133 aaKnown RBP10.55□□□□□ -0.72
CCM2-208ENST00000476594 ZNF177Q13360 481 aaPredicted RBP10.55□□□□□ -0.72
CCM2-208ENST00000476594 EIF4EBP2Q13542 120 aaPredicted RBP10.55□□□□□ -0.72
CCM2-208ENST00000476594 CAMK2GQ13555 558 aaPredicted RBP10.55□□□□□ -0.72
CCM2-208ENST00000476594 TAF5Q15542 800 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 SKOR2Q2VWA4 1001 aaPredicted RBP10.55□□□□□ -0.72
CCM2-208ENST00000476594 DAB2IPQ5VWQ8 1189 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 NAA35Q5VZE5 725 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 DPY19L2P1Q6NXN4 242 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 ADIPOR2Q86V24 386 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 TMEFF1Q8IYR6 380 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 RGL4Q8IZJ4 473 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 CPA5Q8WXQ8 436 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 TTC17Q96AE7 1141 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 EDEM2Q9BV94 578 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 NUP58Q9BVL2 599 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 PCED1AQ9H1Q7 454 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 EVLQ9UI08 416 aaPredicted RBP10.55□□□□□ -0.72
CCM2-208ENST00000476594 SLC25A13Q9UJS0 675 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 NOCTQ9UK39 431 aaKnown RBP10.55□□□□□ -0.72
CCM2-208ENST00000476594 HCN2Q9UL51 889 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 CLEC4EQ9ULY5 219 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 NCKAP1Q9Y2A7 1128 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 EML5Q05BV3 1969 aa10.55□□□□□ -0.72
CCM2-208ENST00000476594 PLXND1Q9Y4D7 1925 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 THADAQ6YHU6 1953 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 MEI4A8MW99 385 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 SERPINC1P01008 464 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 CYP1A1P04798 512 aaPredicted RBP10.54□□□□□ -0.72
CCM2-208ENST00000476594 PRKCHP24723 683 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 RDXP35241 583 aaKnown RBP10.54□□□□□ -0.72
CCM2-208ENST00000476594 CSKP41240 450 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 CXCR3P49682 368 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 KLK7P49862 253 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 SGSHP51688 502 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 CDH4P55283 916 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 KRT83P78385 493 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 ECT2LQ008S8 904 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 ZNF33AQ06730 810 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 NCAPHQ15003 741 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 SF3A2Q15428 464 aaKnown RBP10.54□□□□□ -0.72
CCM2-208ENST00000476594 DUOXA1Q1HG43 343 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 PLEKHG6Q3KR16 790 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 PITRM1Q5JRX3 1037 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 TMEM215Q68D42 235 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 ZNF776Q68DI1 518 aaPredicted RBP10.54□□□□□ -0.72
CCM2-208ENST00000476594 ARMCX6Q7L4S7 300 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 DSG4Q86SJ6 1040 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 CCAR2Q8N163 923 aaKnown RBP10.54□□□□□ -0.72
CCM2-208ENST00000476594 CFAP52Q8N1V2 620 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 CADM4Q8NFZ8 388 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 CYB5D2Q8WUJ1 264 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 SORCS1Q8WY21 1168 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms