RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	HAT1	O14929	419 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CD3EAP	O15446	510 aa	Known RBP	6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KCNN4	O15554	427 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NDUFS3	O75489	264 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PGK2	P07205	417 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RBP3	P10745	1247 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FOSL2	P15408	326 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ATP6V1B2	P21281	511 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GP5	P40197	560 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RAP1GAP	P47736	663 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GPC3	P51654	580 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SLC16A1	P53985	500 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GCNT1	Q02742	428 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CNTN1	Q12860	1018 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DGKZ	Q13574	1117 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TYSND1	Q2T9J0	566 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM102A	Q5T9C2	384 aa	Predicted RBP	6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MFSD7	Q6UXD7	560 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ULK2	Q8IYT8	1036 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ABRA	Q8N0Z2	381 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EXD1	Q8NHP7	514 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GIPC3	Q8TF64	312 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZNF606	Q8WXB4	792 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	BHMT	Q93088	406 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HAVCR1	Q96D42	359 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DCUN1D1	Q96GG9	259 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NDN	Q99608	321 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MRPL4	Q9BYD3	311 aa	Known RBP	6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZDHHC18	Q9NUE0	388 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HOXC10	Q9NYD6	342 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GRHL1	Q9NZI5	618 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EHD3	Q9NZN3	535 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TRMT6	Q9UJA5	497 aa	Known RBP	6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DNPEP	Q9ULA0	475 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FARP1	Q9Y4F1	1045 aa	Predicted RBP	6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RAD54B	Q9Y620	910 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	UBR2	Q8IWV8	1755 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SPATA31A6	Q5VVP1	1343 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CCDC88A	Q3V6T2	1871 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM220BP	B1ANY3	271 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ATG7	O95352	703 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FDX1	P10109	184 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TFE3	P19532	575 aa	Predicted RBP	6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PTGIR	P43119	386 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KCNJ2	P63252	427 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZDHHC24	Q6UX98	284 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TLCD1	Q96CP7	247 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NSMCE2	Q96MF7	247 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	IL1RL2	Q9HB29	575 aa		6.24	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MYH11	P35749	1972 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TIMM44	O43615	452 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZC3H11A	O75152	810 aa	Known RBP eCLIP	6.23	□□□□□ -1.41	2e-8	■■□□□ 12
HNRNPU-208	ENST00000475997	PIAS1	O75925	651 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GH1	P01241	217 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CHRNB2	P17787	502 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MYL12A	P19105	171 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GCLC	P48506	637 aa	Predicted RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ACLY	P53396	1101 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RIPPLY1	Q0D2K3	151 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SMAD1	Q15797	465 aa	Known RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ATP13A5	Q4VNC0	1218 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	AGAP9	Q5VTM2	703 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DSTYK	Q6XUX3	929 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ATG14	Q6ZNE5	492 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SAMD7	Q7Z3H4	446 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MTDH	Q86UE4	582 aa	Known RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CAMK1D	Q8IU85	385 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZC3H3	Q8IXZ2	948 aa	Known RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CACTIN-AS1	Q8N1I8	211 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	POP5	Q969H6	163 aa	Known RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ATXN7L3B	Q96GX2	97 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM167A	Q96KS9	214 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GALNT8	Q9NY28	637 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RAPGEFL1	Q9UHV5	662 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PKP3	Q9Y446	797 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CSAD	Q9Y600	493 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ASTN2	O75129	1339 aa	Predicted RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DOT1L	Q8TEK3	1739 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997		M0QYV0	167 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GRAP2	O75791	330 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ANXA6	P08133	673 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ME2	P23368	584 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	STIP1	P31948	543 aa	Known RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ALDH5A1	P51649	535 aa	Predicted RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	XIAP	P98170	497 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ORC1	Q13415	861 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NFYC	Q13952	458 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KIZ	Q2M2Z5	673 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KIAA1841	Q6NSI8	718 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KCNV1	Q6PIU1	500 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EPHX4	Q8IUS5	362 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	THEM5	Q8N1Q8	247 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SFRP1	Q8N474	314 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	LRRC71	Q8N4P6	559 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ANKRD49	Q8WVL7	239 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PRCC	Q92733	491 aa	Predicted RBP	6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GPRASP2	Q96D09	838 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM111A	Q96PZ2	611 aa		6.23	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RSAD1	Q9HA92	442 aa		6.23	□□□□□ -1.41

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