RNA–Protein interactions for RNA: ENST00000475965.1

HDAC10-210, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,239 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-210ENST00000475965 CLEC4CQ8WTT0 213 aa18.92■□□□□ 0.62
HDAC10-210ENST00000475965 TTC17Q96AE7 1141 aa18.92■□□□□ 0.62
HDAC10-210ENST00000475965 MYO19Q96H55 970 aa18.92■□□□□ 0.62
HDAC10-210ENST00000475965 HSFY1Q96LI6 401 aa18.92■□□□□ 0.62
HDAC10-210ENST00000475965 PRICKLE1Q96MT3 831 aaPredicted RBP18.92■□□□□ 0.62
HDAC10-210ENST00000475965 PABPC3Q9H361 631 aaKnown RBP18.92■□□□□ 0.62
HDAC10-210ENST00000475965 COL5A1P20908 1838 aaPredicted RBP18.92■□□□□ 0.62
HDAC10-210ENST00000475965 URB1O60287 2271 aaKnown RBP18.91■□□□□ 0.62
HDAC10-210ENST00000475965 H0Y8X5 98 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 TNFSF14O43557 240 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 RNASEH1O60930 286 aaKnown RBP18.91■□□□□ 0.62
HDAC10-210ENST00000475965 BRD2P25440 801 aaKnown RBP18.91■□□□□ 0.62
HDAC10-210ENST00000475965 CSKP41240 450 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 CTSKP43235 329 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 SFSWAPQ12872 951 aaKnown RBP18.91■□□□□ 0.62
HDAC10-210ENST00000475965 ACAP1Q15027 740 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 HNRNPA1L2Q32P51 320 aaKnown RBP18.91■□□□□ 0.62
HDAC10-210ENST00000475965 KIAA0895LQ68EN5 471 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 NADSYN1Q6IA69 706 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 CCDC117Q8IWD4 279 aaPredicted RBP18.91■□□□□ 0.62
HDAC10-210ENST00000475965 SMARCE1Q969G3 411 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 LMLNQ96KR4 655 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 FCRL2Q96LA5 508 aaPredicted RBP18.91■□□□□ 0.62
HDAC10-210ENST00000475965 SERPINB11Q96P15 392 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 ZSWIM1Q9BR11 485 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 ACE2Q9BYF1 805 aaPredicted RBP18.91■□□□□ 0.62
HDAC10-210ENST00000475965 MTG2Q9H4K7 406 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 FBXL12Q9NXK8 326 aa18.91■□□□□ 0.62
HDAC10-210ENST00000475965 KNTC1P50748 2209 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 FAM47DPA6NHR8 397 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 RNF225M0QZC1 329 aaPredicted RBP18.9■□□□□ 0.62
HDAC10-210ENST00000475965 KCNK3O14649 394 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 PSMA7O14818 248 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 PMM2O15305 246 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 DFNA5O60443 496 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 SIN3BO75182 1162 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 IGHV4-34P06331 123 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 C21orf59P57076 290 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 RPS24P62847 133 aaKnown RBP18.9■□□□□ 0.62
HDAC10-210ENST00000475965 RACK1P63244 317 aaKnown RBP18.9■□□□□ 0.62
HDAC10-210ENST00000475965 CETN1Q12798 172 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 STIM1Q13586 685 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 CDH18Q13634 790 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 DHX40Q8IX18 779 aaKnown RBP18.9■□□□□ 0.62
HDAC10-210ENST00000475965 CARNMT1Q8N4J0 409 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 KDM1BQ8NB78 822 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 SPATA20Q8TB22 786 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 CEP63Q96MT8 703 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 ORAI3Q9BRQ5 295 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 MIS12Q9H081 205 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 DKK4Q9UBT3 224 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 INTS6Q9UL03 887 aaKnown RBP18.9■□□□□ 0.62
HDAC10-210ENST00000475965 TLR6Q9Y2C9 796 aa18.9■□□□□ 0.62
HDAC10-210ENST00000475965 GCN1Q92616 2671 aaKnown RBP18.9■□□□□ 0.62
HDAC10-210ENST00000475965 GOLGA6L4A6NEF3 574 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 PAPSS1O43252 624 aaPredicted RBP18.89■□□□□ 0.61
HDAC10-210ENST00000475965 SART1O43290 800 aaKnown RBP18.89■□□□□ 0.61
HDAC10-210ENST00000475965 NNTQ13423 1086 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 ARID5BQ14865 1188 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 CST6Q15828 149 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 COL28A1Q2UY09 1125 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 CCDC40Q4G0X9 1142 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 KCNT1Q5JUK3 1230 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 PDZD3Q86UT5 571 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 DQX1Q8TE96 717 aaKnown RBP18.89■□□□□ 0.61
HDAC10-210ENST00000475965 KAT5Q92993 513 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 SKA1Q96BD8 255 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 FAM149B1Q96BN6 582 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 MRGPRX3Q96LB0 322 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 NUCKS1Q9H1E3 243 aaKnown RBP18.89■□□□□ 0.61
HDAC10-210ENST00000475965 FTSJ1Q9UET6 329 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 SERGEFQ9UGK8 458 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 HOOK1Q9UJC3 728 aaKnown RBP18.89■□□□□ 0.61
HDAC10-210ENST00000475965 RAXQ9Y2V3 346 aa18.89■□□□□ 0.61
HDAC10-210ENST00000475965 A0A1W2PP55 124 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 A0A1W2PPC4 97 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 LRRC72A6NJI9 287 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 VILLO15195 856 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 MID1O15344 667 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 MOCS3O95396 460 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 CALCAP01258 141 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 FYNP06241 537 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 SRPRAP08240 638 aaKnown RBP18.88■□□□□ 0.61
HDAC10-210ENST00000475965 GALCP54803 685 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 IL9RQ01113 521 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 CCDC157Q569K6 752 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 MS4A13Q5J8X5 152 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 PITRM1Q5JRX3 1037 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 NCEH1Q6PIU2 408 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 ERCC4Q92889 916 aaPredicted RBP18.88■□□□□ 0.61
HDAC10-210ENST00000475965 MYEOVQ96EZ4 313 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 SLC6A18Q96N87 628 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 OMDQ99983 421 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 TRIM62Q9BVG3 475 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 FZD4Q9ULV1 537 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 ERVW-1Q9UQF0 538 aa18.88■□□□□ 0.61
HDAC10-210ENST00000475965 EDDM13A0A1B0GTR0 161 aa18.87■□□□□ 0.61
HDAC10-210ENST00000475965 TARSL2A2RTX5 802 aaKnown RBP18.87■□□□□ 0.61
HDAC10-210ENST00000475965 P4HA2O15460 535 aa18.87■□□□□ 0.61
HDAC10-210ENST00000475965 RNASEH2AO75792 299 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms