RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
U2AF1-209ENST00000475639 MAGEA4P43358 317 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 NAA20P61599 178 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 PFKPQ01813 784 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 RELAQ04206 551 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 TTLL4Q14679 1199 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 GRM4Q14833 912 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 PDK1Q15118 436 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 NFIL3Q16649 462 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 IL31Q6EBC2 164 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 C4orf22Q6V702 233 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 ENKURQ8TC29 256 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 APOL5Q9BWW9 433 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 TNPO2O14787 897 aaKnown RBP11.77□□□□□ -0.53
U2AF1-209ENST00000475639 FKBP6O75344 327 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 ABHD2P08910 425 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 NUDT2P50583 147 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 FOLH1Q04609 750 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 DMPKQ09013 629 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 TLR1Q15399 786 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 CYP4A22Q5TCH4 519 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 NAPEPLDQ6IQ20 393 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 TMC7Q7Z402 723 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 TDRPQ86YL5 185 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 ATG16L2Q8NAA4 619 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 ITGB1BP2Q9UKP3 347 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 MYH11P35749 1972 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 A0A1B0GUL6 1792 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 SH3PXD2BA1X283 911 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 CAPN14A8MX76 684 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 CYP26A1O43174 497 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 CAMTA2O94983 1202 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 HSMCR30P0CW71 290 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 CYP2D6P10635 497 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 CYP51A1Q16850 503 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 SPANXN2Q5MJ10 180 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 KIAA0408Q6ZU52 694 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 C11orf96Q7Z7L8 435 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 SEPT1Q8WYJ6 367 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 AGPAT1Q99943 283 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 RMND5AQ9H871 391 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
U2AF1-209ENST00000475639 EMSYQ7Z589 1322 aa11.77□□□□□ -0.53
U2AF1-209ENST00000475639 C10orf71Q711Q0 1435 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 POTECB2RU33 542 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 BCL10O95999 233 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 STAT5AP42229 794 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 STAT5BP51692 787 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 PDCD4Q53EL6 469 aaKnown RBP11.76□□□□□ -0.53
U2AF1-209ENST00000475639 DGKKQ5KSL6 1271 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 STX12Q86Y82 276 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 EPHX4Q8IUS5 362 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 CYP4Z2PQ8N1L4 340 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 SLC20A1Q8WUM9 679 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF341Q9BYN7 854 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 MANSC1Q9H8J5 431 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 ACP6Q9NPH0 428 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 KLHL11Q9NVR0 708 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 WWOXQ9NZC7 414 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 CRLS1Q9UJA2 301 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 ABT1Q9ULW3 272 aaKnown RBP11.76□□□□□ -0.53
U2AF1-209ENST00000475639 SNX13Q9Y5W8 968 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 KPNA4O00629 521 aaPredicted RBP11.76□□□□□ -0.53
U2AF1-209ENST00000475639 FBP2O00757 339 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 ZBTB5O15062 677 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 SUPT7LO94864 414 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L8P0C7I0 530 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 GSTT2P0CG29 244 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 GSTT2BP0CG30 244 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 RXRGP48443 463 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 PSMC5P62195 406 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 SPATA2LQ8IUW3 424 aaPredicted RBP11.76□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF669Q96BR6 464 aaPredicted RBP11.76□□□□□ -0.53
U2AF1-209ENST00000475639 HERPUD2Q9BSE4 406 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 FAM47E-STBD1D6RA91 191 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 FSCN2O14926 492 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 LSM1O15116 133 aaKnown RBP11.76□□□□□ -0.53
U2AF1-209ENST00000475639 P4HA2O15460 535 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 CDK8P49336 464 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 MTMR2Q13614 643 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 FAM91A1Q658Y4 838 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 UGT3A1Q6NUS8 523 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 HAUS6Q7Z4H7 955 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 NANOGNBQ7Z5D8 188 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 CHSY1Q86X52 802 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 CCDC126Q96EE4 140 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 DHRS1Q96LJ7 313 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 COPS7BQ9H9Q2 264 aaPredicted RBP11.76□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF302Q9NR11 478 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 XPO7Q9UIA9 1087 aaKnown RBP11.76□□□□□ -0.53
U2AF1-209ENST00000475639 CACNA1SQ13698 1873 aa11.76□□□□□ -0.53
U2AF1-209ENST00000475639 MYOCOSA0A1B0GUC4 107 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 LCP1P13796 627 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 MAPK1P28482 360 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PSMD4P55036 377 aaKnown RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PIGHQ14442 188 aaPredicted RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 FASTKD3Q14CZ7 662 aaKnown RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 SYCP2LQ5T4T6 812 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PCNX4Q63HM2 1172 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms