RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 IRF2BP2Q7Z5L9 587 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 PIM3Q86V86 326 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 Q8N9P0 234 aaPredicted RBP7.17□□□□□ -1.26
SMC5-203ENST00000475540 OR52N4Q8NGI2 321 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 OR1N1Q8NGS0 311 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 POF1BQ8WVV4 589 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 RMDN3Q96TC7 470 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 DACT1Q9NYF0 836 aa7.17□□□□□ -1.26
SMC5-203ENST00000475540 TRBV5-3A0A0A0MS03 114 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 FAM90A18PA6NE21 464 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 FAM90A16PA6NEW6 464 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 FAM90A9PA6NNJ1 464 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 SLC38A8A6NNN8 435 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 FAM90A5PA8MXJ8 464 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 TULP3O75386 442 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 ACTL6BO94805 426 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 FAM90A15PP0C7V4 464 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 FAM90A14PP0C7W9 464 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 CCT4P50991 539 aaKnown RBP7.16□□□□□ -1.26
SMC5-203ENST00000475540 AP2B1P63010 937 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 BLMHQ13867 455 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 RPS6KA2Q15349 733 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 DLGAP5Q15398 846 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 TBRG1Q3YBR2 411 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 MIDNQ504T8 468 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 RINLQ6ZS11 566 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 RAB11FIP2Q7L804 512 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 ADGRF3Q8IZF5 1079 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 ZBTB9Q96C00 473 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 PIMREGQ9BSJ6 248 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 TMEM120AQ9BXJ8 343 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 MLXIPQ9HAP2 919 aa7.16□□□□□ -1.26
SMC5-203ENST00000475540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMC5-203ENST00000475540 AGO2Q9UKV8 859 aaKnown RBP7.16□□□□□ -1.26
SMC5-203ENST00000475540 TTBK1Q5TCY1 1321 aaPredicted RBP7.16□□□□□ -1.26
SMC5-203ENST00000475540 MYMKA6NI61 221 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 TRIM38O00635 465 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 NFATC1O95644 943 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 CSTBP04080 98 aaKnown RBP7.15□□□□□ -1.26
SMC5-203ENST00000475540 CIITAP33076 1130 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 CDK7P50613 346 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 FAM3BP58499 235 aaPredicted RBP7.15□□□□□ -1.26
SMC5-203ENST00000475540 RHBDL3P58872 404 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 PGM5Q15124 567 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 CCDC38Q502W7 563 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 MANEAQ5SRI9 462 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 ISM2Q6H9L7 571 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 LRIG3Q6UXM1 1119 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 SLC44A2Q8IWA5 706 aaPredicted RBP7.15□□□□□ -1.26
SMC5-203ENST00000475540 MMP21Q8N119 569 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 ZNF548Q8NEK5 533 aaPredicted RBP7.15□□□□□ -1.26
SMC5-203ENST00000475540 OSBPL5Q9H0X9 879 aaPredicted RBP7.15□□□□□ -1.26
SMC5-203ENST00000475540 UTS2RQ9UKP6 389 aa7.15□□□□□ -1.26
SMC5-203ENST00000475540 KIR2DS5A0A0G2JLQ3 304 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 MBD3L5A6NJ08 208 aaPredicted RBP7.14□□□□□ -1.27
SMC5-203ENST00000475540 KIR2DS3K7RE56 304 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 TLX3O43711 291 aaPredicted RBP7.14□□□□□ -1.27
SMC5-203ENST00000475540 ZNF260Q3ZCT1 412 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 C10orf76Q5T2E6 689 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 GLCCI1Q86VQ1 547 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 PAQR4Q8N4S7 273 aaPredicted RBP7.14□□□□□ -1.27
SMC5-203ENST00000475540 ZNF366Q8N895 744 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 CPT1BQ92523 772 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 LTV1Q96GA3 475 aaPredicted RBP7.14□□□□□ -1.27
SMC5-203ENST00000475540 SORBS1Q9BX66 1292 aaKnown RBP7.14□□□□□ -1.27
SMC5-203ENST00000475540 ELAC1Q9H777 363 aaKnown RBP7.14□□□□□ -1.27
SMC5-203ENST00000475540 DECR2Q9NUI1 292 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 DAPP1Q9UN19 280 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 C19orf53Q9UNZ5 99 aaPredicted RBP7.14□□□□□ -1.27
SMC5-203ENST00000475540 TNFSF13BQ9Y275 285 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 PCDHA10Q9Y5I2 948 aa7.14□□□□□ -1.27
SMC5-203ENST00000475540 COPG1Q9Y678 874 aaKnown RBP7.14□□□□□ -1.27
SMC5-203ENST00000475540 ACKR2O00590 384 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 ZC3H11AO75152 810 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMC5-203ENST00000475540 PCP4P48539 62 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 KRTAP10-11P60412 298 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 HNRNPA0Q13151 305 aaKnown RBP7.13□□□□□ -1.27
SMC5-203ENST00000475540 GPR162Q16538 588 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 AWAT2Q6E213 333 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 ERAP2Q6P179 960 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 CYB5R4Q7L1T6 521 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 ENAHQ8N8S7 591 aaPredicted RBP7.13□□□□□ -1.27
SMC5-203ENST00000475540 SCAMP5Q8TAC9 235 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 CLEC4CQ8WTT0 213 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 VCPIP1Q96JH7 1222 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 PABPC3Q9H361 631 aaKnown RBP7.13□□□□□ -1.27
SMC5-203ENST00000475540 SEMA4BQ9NPR2 832 aaPredicted RBP7.13□□□□□ -1.27
SMC5-203ENST00000475540 PRDM8Q9NQV8 689 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 THSD1Q9NS62 852 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 MSRB1Q9NZV6 116 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 COG5Q9UP83 839 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 LAMP3Q9UQV4 416 aa7.13□□□□□ -1.27
SMC5-203ENST00000475540 ZNF814B7Z6K7 855 aa7.12□□□□□ -1.27
SMC5-203ENST00000475540 SCP2P22307 547 aa7.12□□□□□ -1.27
SMC5-203ENST00000475540 ALDH7A1P49419 539 aaKnown RBP7.12□□□□□ -1.27
SMC5-203ENST00000475540 RCAN1P53805 252 aa7.12□□□□□ -1.27
SMC5-203ENST00000475540 POLGP54098 1239 aaPredicted RBP7.12□□□□□ -1.27
SMC5-203ENST00000475540 TRIM14Q14142 442 aa7.12□□□□□ -1.27
SMC5-203ENST00000475540 COLCA1Q6ZS62 124 aa7.12□□□□□ -1.27
SMC5-203ENST00000475540 EXD3Q8N9H8 876 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms