RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 TNFSF14O43557 240 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 PCDHGA12O60330 932 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 SIN3BO75182 1162 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 APC2O95996 2303 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 CALCAP01258 141 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 IGHV4-34P06331 123 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 CTSKP43235 329 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 RPS24P62847 133 aaKnown RBP25.84■■□□□ 1.73
TMEM54-205ENST00000475208 ACAP1Q15027 740 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 STILQ15468 1287 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 USP30Q70CQ3 517 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 MARCH9Q86YJ5 346 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 FCRL2Q96LA5 508 aaPredicted RBP25.84■■□□□ 1.73
TMEM54-205ENST00000475208 DDX50Q9BQ39 737 aaKnown RBP25.84■■□□□ 1.73
TMEM54-205ENST00000475208 METTL14Q9HCE5 456 aaKnown RBP25.84■■□□□ 1.73
TMEM54-205ENST00000475208 FBXL12Q9NXK8 326 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 SERGEFQ9UGK8 458 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 SCML1Q9UN30 329 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 RAXQ9Y2V3 346 aa25.84■■□□□ 1.73
TMEM54-205ENST00000475208 FBXO21O94952 628 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 SMC2O95347 1197 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 ASLP04424 464 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 IL9RQ01113 521 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 COL28A1Q2UY09 1125 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 HNRNPA1L2Q32P51 320 aaKnown RBP25.83■■□□□ 1.73
TMEM54-205ENST00000475208 DHX40Q8IX18 779 aaKnown RBP25.83■■□□□ 1.73
TMEM54-205ENST00000475208 GALNT15Q8N3T1 639 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 CARNMT1Q8N4J0 409 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 DQX1Q8TE96 717 aaKnown RBP25.83■■□□□ 1.73
TMEM54-205ENST00000475208 SMARCE1Q969G3 411 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 MRGPRX3Q96LB0 322 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 SERPINB11Q96P15 392 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 NUCKS1Q9H1E3 243 aaKnown RBP25.83■■□□□ 1.73
TMEM54-205ENST00000475208 ACACAQ13085 2346 aa25.83■■□□□ 1.73
TMEM54-205ENST00000475208 RNASEH1O60930 286 aaKnown RBP25.82■■□□□ 1.72
TMEM54-205ENST00000475208 CDH18Q13634 790 aa25.82■■□□□ 1.72
TMEM54-205ENST00000475208 CCDC157Q569K6 752 aa25.82■■□□□ 1.72
TMEM54-205ENST00000475208 PDZD3Q86UT5 571 aa25.82■■□□□ 1.72
TMEM54-205ENST00000475208 ENGASEQ8NFI3 743 aa25.82■■□□□ 1.72
TMEM54-205ENST00000475208 SPATA20Q8TB22 786 aa25.82■■□□□ 1.72
TMEM54-205ENST00000475208 SLC6A18Q96N87 628 aa25.82■■□□□ 1.72
TMEM54-205ENST00000475208 ACE2Q9BYF1 805 aaPredicted RBP25.82■■□□□ 1.72
TMEM54-205ENST00000475208 A0A1W2PP55 124 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 PSMA7O14818 248 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 PMM2O15305 246 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 MID1O15344 667 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 FYNP06241 537 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 C21orf59P57076 290 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 RACK1P63244 317 aaKnown RBP25.81■■□□□ 1.72
TMEM54-205ENST00000475208 CST6Q15828 149 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 INAVAQ3KP66 663 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 CCDC40Q4G0X9 1142 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 FSCBQ5H9T9 825 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 MS4A13Q5J8X5 152 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 PITRM1Q5JRX3 1037 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 NCEH1Q6PIU2 408 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 MMS22LQ6ZRQ5 1243 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 CCDC117Q8IWD4 279 aaPredicted RBP25.81■■□□□ 1.72
TMEM54-205ENST00000475208 CFAP52Q8N1V2 620 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 CEP63Q96MT8 703 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 GTPBP4Q9BZE4 634 aaKnown RBP25.81■■□□□ 1.72
TMEM54-205ENST00000475208 TLR6Q9Y2C9 796 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 PLXNA2O75051 1894 aa25.81■■□□□ 1.72
TMEM54-205ENST00000475208 A0A1W2PPC4 97 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 VILLO15195 856 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 MOCS2O96007 188 aaPredicted RBP25.8■■□□□ 1.72
TMEM54-205ENST00000475208 GALCP54803 685 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 SFSWAPQ12872 951 aaKnown RBP25.8■■□□□ 1.72
TMEM54-205ENST00000475208 NNTQ13423 1086 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 RRAGAQ7L523 313 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 MMAAQ8IVH4 418 aaKnown RBP25.8■■□□□ 1.72
TMEM54-205ENST00000475208 KDM1BQ8NB78 822 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 LMO3Q8TAP4 145 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 ADAM32Q8TC27 787 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 FAM149B1Q96BN6 582 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 SLC39A13Q96H72 371 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 DKK4Q9UBT3 224 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 ERVW-1Q9UQF0 538 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 NAALADL1Q9UQQ1 740 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 CELSR3Q9NYQ7 3312 aa25.8■■□□□ 1.72
TMEM54-205ENST00000475208 FAM149AA5PLN7 773 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 PAPSS1O43252 624 aaPredicted RBP25.79■■□□□ 1.72
TMEM54-205ENST00000475208 DFNA5O60443 496 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 RNASEH2AO75792 299 aaKnown RBP25.79■■□□□ 1.72
TMEM54-205ENST00000475208 LUC7L3O95232 432 aaKnown RBP25.79■■□□□ 1.72
TMEM54-205ENST00000475208 CTSOP43234 321 aaPredicted RBP25.79■■□□□ 1.72
TMEM54-205ENST00000475208 CETN1Q12798 172 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 STIM1Q13586 685 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 ARID5BQ14865 1188 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 DCAF6Q58WW2 860 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 C9orf64Q5T6V5 341 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 TAC4Q86UU9 113 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 ARHGEF19Q8IW93 802 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 HNRNPLLQ8WVV9 542 aaKnown RBP25.79■■□□□ 1.72
TMEM54-205ENST00000475208 NEUROG2Q9H2A3 272 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 ST7Q9NRC1 585 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 FTSJ1Q9UET6 329 aa25.79■■□□□ 1.72
TMEM54-205ENST00000475208 FASNP49327 2511 aaKnown RBP25.79■■□□□ 1.72
TMEM54-205ENST00000475208 TP53BP1Q12888 1972 aaPredicted RBP25.78■■□□□ 1.72
TMEM54-205ENST00000475208 A0A1B0GTQ1 180 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms