RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 GDE1Q9NZC3 331 aa9.84□□□□□ -0.83
DDX39B-217ENST00000474961 CFAP97Q9P2B7 532 aa9.84□□□□□ -0.83
DDX39B-217ENST00000474961 CDH7Q9ULB5 785 aa9.84□□□□□ -0.83
DDX39B-217ENST00000474961 CCL26Q9Y258 94 aa9.84□□□□□ -0.83
DDX39B-217ENST00000474961 HS3ST4Q9Y661 456 aa9.84□□□□□ -0.83
DDX39B-217ENST00000474961 GOLGA6L7A0A1B0GV03 622 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 FAM72CH0Y354 149 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 CES2O00748 559 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 CEP104O60308 925 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 GREM1O60565 184 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 PRAMEF12O95522 483 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 KCNA5P22460 613 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 IL4RP24394 825 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 CETN2P41208 172 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 SLC11A2P49281 568 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 MLLT6P55198 1093 aaPredicted RBP9.83□□□□□ -0.84
DDX39B-217ENST00000474961 SEMA3BQ13214 749 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 MTA1Q13330 715 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 DPYSL3Q14195 570 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 LLGL1Q15334 1064 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 TAZQ16635 292 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 PPP6R3Q5H9R7 873 aaPredicted RBP9.83□□□□□ -0.84
DDX39B-217ENST00000474961 MS4A13Q5J8X5 152 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 FAM78AQ5JUQ0 283 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 SEL1L2Q5TEA6 688 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 FAM72AQ5TYM5 149 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 PIK3R6Q5UE93 754 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 NADSYN1Q6IA69 706 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 FAM72DQ6L9T8 149 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 SPOCD1Q6ZMY3 1216 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 HTR3DQ70Z44 454 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 ANKS1BQ7Z6G8 1248 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 C14orf80Q86SX3 495 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 FAM72BQ86X60 149 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 DDX42Q86XP3 938 aaKnown RBP eCLIP9.83□□□□□ -0.84
DDX39B-217ENST00000474961 MAP7D3Q8IWC1 876 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 TTC16Q8NEE8 873 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 SUSD6Q92537 303 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 MS4A14Q96JA4 679 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 C1orf74Q96LT6 269 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 ASB16Q96NS5 453 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 NECTIN4Q96NY8 510 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 CALN1Q9BXU9 219 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 CWC15Q9P013 229 aaKnown RBP9.83□□□□□ -0.84
DDX39B-217ENST00000474961 OR12D3Q9UGF7 316 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 FKBPLQ9UIM3 349 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 LSM7Q9UK45 103 aaKnown RBP9.83□□□□□ -0.84
DDX39B-217ENST00000474961 AGO1Q9UL18 857 aaKnown RBP9.83□□□□□ -0.84
DDX39B-217ENST00000474961 SH3BP1Q9Y3L3 701 aa9.83□□□□□ -0.84
DDX39B-217ENST00000474961 USP15Q9Y4E8 981 aaPredicted RBP9.83□□□□□ -0.84
DDX39B-217ENST00000474961 KIF26AQ9ULI4 1882 aaPredicted RBP9.83□□□□□ -0.84
DDX39B-217ENST00000474961 hCG_1818297A0A087WSY0 165 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 E2F8A0AVK6 867 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 H3BRJ5 948 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 EEF2KO00418 725 aaKnown RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 SCAMP3O14828 347 aaKnown RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 MBTPS2O43462 519 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 CREB3O43889 395 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 LRIG2O94898 1065 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 LATS1O95835 1130 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 KRT10P13645 584 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 TCF3P15923 654 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 GOT1P17174 413 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 TACR2P21452 398 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 GBP2P32456 591 aaPredicted RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 PTPN7P35236 360 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 ARL4AP40617 200 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 CDKN2BP42772 138 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 NRG1Q02297 640 aaPredicted RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 USP4Q13107 963 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 SMAD4Q13485 552 aaKnown RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 AUHQ13825 339 aaKnown RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 ZNF77Q15935 545 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 PPP2R5EQ16537 467 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 FAM133BQ5BKY9 247 aaKnown RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 ANKRD20A8PQ5CZ79 823 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 TFDP3Q5H9I0 405 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 ARTNQ5T4W7 220 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 ADGRF1Q5T601 910 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 ACBD5Q5T8D3 534 aaPredicted RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 KAZNQ674X7 775 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 RAP1GAP2Q684P5 730 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 CHSY1Q86X52 802 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 VSIG1Q86XK7 387 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 CREG2Q8IUH2 290 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 RASGEF1CQ8N431 466 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 CELF5Q8N6W0 485 aaKnown RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 RIN3Q8TB24 985 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 FAM174AQ8TBP5 190 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 SMARCD2Q92925 531 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 CAPZA3Q96KX2 299 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 CSPG4P5Q96PW8 444 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 PRMT1Q99873 361 aaKnown RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 DDX50Q9BQ39 737 aaKnown RBP9.82□□□□□ -0.84
DDX39B-217ENST00000474961 ZNF670Q9BS34 389 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 HERPUD2Q9BSE4 406 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 HEMGNQ9BXL5 484 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 OSBPL8Q9BZF1 889 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 KIF9Q9HAQ2 790 aa9.82□□□□□ -0.84
DDX39B-217ENST00000474961 PRM3Q9NNZ6 103 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms