RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CYP4X1Q8N118 509 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 MREGQ8N565 214 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 LZTR1Q8N653 840 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 KREMEN2Q8NCW0 462 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 ART4Q93070 314 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 FATE1Q969F0 183 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 BTN2A3PQ96KV6 586 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 TRIM51Q9BSJ1 452 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 TXLNGYQ9BZA5 131 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 BRD8Q9H0E9 1235 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 CCSER2Q9H7U1 834 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 PCDH9Q9HC56 1237 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 ZNF334Q9HCZ1 680 aaPredicted RBP6.83□□□□□ -1.32
ATG4A-207ENST00000474825 ARFGAP3Q9NP61 516 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 ALG13Q9NP73 1137 aaKnown RBP6.83□□□□□ -1.32
ATG4A-207ENST00000474825 ETNK2Q9NVF9 386 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 ZNF446Q9NWS9 450 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 TRPM5Q9NZQ8 1165 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 MARCH2Q9P0N8 246 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 SAE1Q9UBE0 346 aaPredicted RBP6.83□□□□□ -1.32
ATG4A-207ENST00000474825 ZNF212Q9UDV6 495 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 OR12D3Q9UGF7 316 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 RASAL2Q9UJF2 1139 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 DNMT3LQ9UJW3 386 aa6.83□□□□□ -1.32
ATG4A-207ENST00000474825 YBX2Q9Y2T7 364 aaKnown RBP6.83□□□□□ -1.32
ATG4A-207ENST00000474825 CLUHO75153 1309 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 C5orf60A6NFR6 353 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 EEF2KO00418 725 aaKnown RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 NDC80O14777 642 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 NCAM2O15394 837 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 FGF10O15520 208 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 MSI1O43347 362 aaKnown RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 COCHO43405 550 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 GREM1O60565 184 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 CLASP2O75122 1294 aaKnown RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 ERLIN1O75477 346 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 GCATO75600 419 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 ZMYND10O75800 440 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 SEC31AO94979 1220 aaKnown RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 GLUD1P00367 558 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 C8AP07357 584 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 CA3P07451 260 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 HNRNPA1P09651 372 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 ERCC2P18074 760 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 IRS1P35568 1242 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 MAGEA6P43360 314 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 RPL21P46778 160 aaKnown RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 EIF3EP60228 445 aaKnown RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 SLC7A9P82251 487 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 COG7P83436 770 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 SMAD3P84022 425 aaKnown RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 CAV1Q03135 178 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 GBE1Q04446 702 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 GALNT2Q10471 571 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 IFRD2Q12894 506 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 SNX1Q13596 522 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 PRKD1Q15139 912 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 RAB30Q15771 203 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 MAP9Q49MG5 647 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 SLC45A4Q5BKX6 768 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 MS4A13Q5J8X5 152 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 SPDYCQ5MJ68 293 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 PIK3R6Q5UE93 754 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 NUGGCQ68CJ6 796 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 NPNTQ6UXI9 565 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 C4orf22Q6V702 233 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 GAREM2Q75VX8 874 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 PDZD4Q76G19 769 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 NLRP14Q86W24 1093 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 RELL1Q8IUW5 271 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 LRRC49Q8IUZ0 686 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 UNC45BQ8IWX7 931 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 FAM217AQ8IXS0 508 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 ATP6V0D2Q8N8Y2 350 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 ZSCAN18Q8TBC5 510 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 PLD4Q96BZ4 506 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 TSGA13Q96PP4 275 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 QKIQ96PU8 341 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 KLF16Q9BXK1 252 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-207ENST00000474825 FUT8Q9BYC5 575 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 PBX4Q9BYU1 374 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 FOXP3Q9BZS1 431 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 PHACTR1Q9C0D0 580 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 RNF38Q9H0F5 515 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 NEUROG2Q9H2A3 272 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 ADAM7Q9H2U9 754 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 ENTPD7Q9NQZ7 604 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 TMEM248Q9NWD8 314 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 ZDHHC7Q9NXF8 308 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 FAM53CQ9NYF3 392 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 SLC12A6Q9UHW9 1150 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 NUDT5Q9UKK9 219 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 NFU1Q9UMS0 254 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 ZNF148Q9UQR1 794 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 HS3ST4Q9Y661 456 aa6.82□□□□□ -1.32
ATG4A-207ENST00000474825 SYNJ2BP-COX16A0A087WUM0 186 aa6.81□□□□□ -1.32
ATG4A-207ENST00000474825 SLC12A8A0AV02 714 aa6.81□□□□□ -1.32
ATG4A-207ENST00000474825 ESYT3A0FGR9 886 aa6.81□□□□□ -1.32
ATG4A-207ENST00000474825 E9PAM4 449 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms