RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 VCPP55072 806 aaKnown RBP10.33□□□□□ -0.76
COL8A1-206ENST00000474648 ADCY2Q08462 1091 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 DPYSQ14117 519 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 KRT81Q14533 505 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 EML3Q32P44 896 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 ALFQ53S48 1182 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 ANKRD20A8PQ5CZ79 823 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 PPP6R3Q5H9R7 873 aaPredicted RBP10.33□□□□□ -0.76
COL8A1-206ENST00000474648 RNF43Q68DV7 783 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 RHBDF2Q6PJF5 856 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 RFX8Q6ZV50 586 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 MTSS1LQ765P7 747 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 CHSY1Q86X52 802 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 VSIG1Q86XK7 387 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 TMEM25Q86YD3 366 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 MAP7D3Q8IWC1 876 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 LGI2Q8N0V4 545 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 CFAP52Q8N1V2 620 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 PQLC3Q8N755 202 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 TDRD5Q8NAT2 981 aaKnown RBP10.33□□□□□ -0.76
COL8A1-206ENST00000474648 PCDH19Q8TAB3 1148 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 COG1Q8WTW3 980 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 OTUB2Q96DC9 234 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 ZFYVE19Q96K21 471 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 PRICKLE1Q96MT3 831 aaPredicted RBP10.33□□□□□ -0.76
COL8A1-206ENST00000474648 CSPG4P5Q96PW8 444 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 RNF157Q96PX1 679 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 OSBPL9Q96SU4 736 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 PSMB7Q99436 277 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 DDX50Q9BQ39 737 aaKnown RBP10.33□□□□□ -0.76
COL8A1-206ENST00000474648 CARD9Q9H257 536 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 ETNK2Q9NVF9 386 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 DUS2Q9NX74 493 aaKnown RBP10.33□□□□□ -0.76
COL8A1-206ENST00000474648 TBC1D14Q9P2M4 693 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 PPARGC1AQ9UBK2 798 aaKnown RBP10.33□□□□□ -0.76
COL8A1-206ENST00000474648 ZNF212Q9UDV6 495 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 SNX12Q9UMY4 172 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 NUMBLQ9Y6R0 609 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 OBSL1O75147 1896 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 DENND4CQ5VZ89 1909 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 hCG_1818297A0A087WSY0 165 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 OTOL1A6NHN0 477 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 WASH4PA8MWX3 477 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 F5H5T6 163 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 H3BRJ5 948 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 KIF2AO00139 706 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 ARNTLO00327 626 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 EEF2KO00418 725 aaKnown RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 SLC9A3R1O14745 358 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 ZNF185O15231 689 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 KRT10P13645 584 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 ARSAP15289 507 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 RHOQP17081 205 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 PSMC3P17980 439 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 AMPD1P23109 780 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 HTR7P34969 479 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 PTPN7P35236 360 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 CHKAP35790 457 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 ZNF135P52742 658 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 COPS2P61201 443 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 RPS24P62847 133 aaKnown RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 GRM2Q14416 872 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 LLGL1Q15334 1064 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 DHCR24Q15392 516 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 PPP2R5EQ16537 467 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 TRIM68Q6AZZ1 485 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 LRRC31Q6UY01 552 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 NLRP14Q86W24 1093 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 SLC44A3Q8N4M1 653 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 DEPDC1BQ8WUY9 529 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 IRF7Q92985 503 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 TBC1D31Q96DN5 1066 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 TMA16Q96EY4 203 aaKnown RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 RBM41Q96IZ5 413 aaKnown RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 PBKQ96KB5 322 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 EPAS1Q99814 870 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 ZNF670Q9BS34 389 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 HEMGNQ9BXL5 484 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 CALN1Q9BXU9 219 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 OSBPL8Q9BZF1 889 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 KLC2Q9H0B6 622 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 KCNK12Q9HB15 430 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 HPS4Q9NQG7 708 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 ARHGEF4Q9NR80 690 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 THG1LQ9NWX6 298 aaKnown RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 MPP6Q9NZW5 540 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 MARK1Q9P0L2 795 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 RCOR3Q9P2K3 495 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 THEGQ9P2T0 379 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 FAM50BQ9Y247 325 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 NR2E1Q9Y466 385 aa10.32□□□□□ -0.76
COL8A1-206ENST00000474648 ARIH1Q9Y4X5 557 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-206ENST00000474648 EYSQ5T1H1 3165 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 PRUNE2Q8WUY3 3088 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 DOCK8Q8NF50 2099 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 TCRBV7S2A1N4TA0A589 114 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 CES2O00748 559 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 DCLK1O15075 740 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 CHADO15335 359 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms