RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ABCG1P45844 678 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 TBX4P57082 545 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 RACK1P63244 317 aaKnown RBP14.53□□□□□ -0.08
CCDC78-209ENST00000474647 KRT85P78386 507 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 DNAJC3Q13217 504 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 CDH18Q13634 790 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 FAM133BQ5BKY9 247 aaKnown RBP14.53□□□□□ -0.08
CCDC78-209ENST00000474647 MSANTD2Q6P1R3 559 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 NCEH1Q6PIU2 408 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 KRBA2Q6ZNG9 492 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 USP30Q70CQ3 517 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 MMAAQ8IVH4 418 aaKnown RBP14.53□□□□□ -0.08
CCDC78-209ENST00000474647 UNC45BQ8IWX7 931 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 SCUBE3Q8IX30 993 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 ZNF557Q8N988 423 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-209ENST00000474647 HJURPQ8NCD3 748 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-209ENST00000474647 KCTD13Q8WZ19 329 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 NXPE2Q96DL1 559 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 PRICKLE1Q96MT3 831 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-209ENST00000474647 OMDQ99983 421 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 SCML1Q9UN30 329 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 CEP83Q9Y592 693 aa14.53□□□□□ -0.08
CCDC78-209ENST00000474647 ASXL3Q9C0F0 2248 aa14.52□□□□□ -0.08
CCDC78-209ENST00000474647 LRRC72A6NJI9 287 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 M0QYV0 167 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 O00370 1275 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 ENC1O14682 589 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 VILLO15195 856 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 IRAK2O43187 625 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 DFNA5O60443 496 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 LDOC1O95751 146 aaPredicted RBP14.52□□□□□ -0.09
CCDC78-209ENST00000474647 IGLV3-27P01718 113 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 LTFP02788 710 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 ITGAVP06756 1048 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 PSMD8P48556 350 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 GALCP54803 685 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 CST6Q15828 149 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 MPP7Q5T2T1 576 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 C6orf118Q5T5N4 469 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 NADSYN1Q6IA69 706 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 CCDC117Q8IWD4 279 aaPredicted RBP14.52□□□□□ -0.09
CCDC78-209ENST00000474647 CLEC4CQ8WTT0 213 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 SKA1Q96BD8 255 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 MYO19Q96H55 970 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 CNDP2Q96KP4 475 aaKnown RBP14.52□□□□□ -0.09
CCDC78-209ENST00000474647 ELF4Q99607 663 aaPredicted RBP14.52□□□□□ -0.09
CCDC78-209ENST00000474647 ATMQ13315 3056 aa14.52□□□□□ -0.09
CCDC78-209ENST00000474647 A0A087WV48 116 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 PAPSS1O43252 624 aaPredicted RBP14.51□□□□□ -0.09
CCDC78-209ENST00000474647 RFPL3O75679 317 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 MOCS2O96007 188 aaPredicted RBP14.51□□□□□ -0.09
CCDC78-209ENST00000474647 ASLP04424 464 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 WNT1P04628 370 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 C7P10643 843 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 JUPP14923 745 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 TBXAS1P24557 533 aaPredicted RBP14.51□□□□□ -0.09
CCDC78-209ENST00000474647 CD38P28907 300 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 CTSOP43234 321 aaPredicted RBP14.51□□□□□ -0.09
CCDC78-209ENST00000474647 NUMBP49757 651 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 RPS24P62847 133 aaKnown RBP14.51□□□□□ -0.09
CCDC78-209ENST00000474647 SEMG2Q02383 582 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 SFSWAPQ12872 951 aaKnown RBP14.51□□□□□ -0.09
CCDC78-209ENST00000474647 HNRNPA1L2Q32P51 320 aaKnown RBP14.51□□□□□ -0.09
CCDC78-209ENST00000474647 TMEM270Q6UE05 265 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 MMS22LQ6ZRQ5 1243 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 TMPRSS12Q86WS5 348 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 CFAP52Q8N1V2 620 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 EID2Q8N6I1 236 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 FIBINQ8TAL6 211 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 TSG101Q99816 390 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 MIS12Q9H081 205 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 NUCKS1Q9H1E3 243 aaKnown RBP14.51□□□□□ -0.09
CCDC78-209ENST00000474647 NEUROG2Q9H2A3 272 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 GOLPH3LQ9H4A5 285 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 EBF2Q9HAK2 575 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 ERVW-1Q9UQF0 538 aa14.51□□□□□ -0.09
CCDC78-209ENST00000474647 HELZ2Q9BYK8 2649 aaKnown RBP14.5□□□□□ -0.09
CCDC78-209ENST00000474647 TTC34A8MYJ7 566 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 E9PAM4 449 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 MOCS3O95396 460 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 CALCAP01258 141 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 BRD2P25440 801 aaKnown RBP14.5□□□□□ -0.09
CCDC78-209ENST00000474647 SLC8A1P32418 973 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 FSCBQ5H9T9 825 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 PITRM1Q5JRX3 1037 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 RNF219Q5W0B1 726 aaPredicted RBP14.5□□□□□ -0.09
CCDC78-209ENST00000474647 PMF1Q6P1K2 205 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 LCLAT1Q6UWP7 414 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 SND1Q7KZF4 910 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCDC78-209ENST00000474647 SCML4Q8N228 414 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 UBR7Q8N806 425 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 OR2T34Q8NGX1 318 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 OR14C36Q8NHC7 312 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 IRGQQ8WZA9 623 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 TFAP2BQ92481 460 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 TTC17Q96AE7 1141 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 MYEOVQ96EZ4 313 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 MRGPRX3Q96LB0 322 aa14.5□□□□□ -0.09
CCDC78-209ENST00000474647 DDX50Q9BQ39 737 aaKnown RBP14.5□□□□□ -0.09
CCDC78-209ENST00000474647 GDF3Q9NR23 364 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms