RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ADAM32Q8TC27 787 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 RNF34Q969K3 372 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 ERGIC2Q96RQ1 377 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 FBRSQ9HAH7 460 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 RTN4Q9NQC3 1192 aaKnown RBP15.68■□□□□ 0.1
VARS-223ENST00000474643 PCDHGC3Q9UN70 934 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 TLR6Q9Y2C9 796 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 PCDHB9Q9Y5E1 797 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 TPRP12270 2363 aaKnown RBP15.68■□□□□ 0.1
VARS-223ENST00000474643 H0Y626 953 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 EPHB6O15197 1021 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 TEX33O43247 280 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 RNASEH1O60930 286 aaKnown RBP15.67■□□□□ 0.1
VARS-223ENST00000474643 DLDP09622 509 aaKnown RBP15.67■□□□□ 0.1
VARS-223ENST00000474643 CYP11B1P15538 503 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 MAOBP27338 520 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 SIM1P81133 766 aaPredicted RBP15.67■□□□□ 0.1
VARS-223ENST00000474643 PIK3R6Q5UE93 754 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 DCAF12L1Q5VU92 463 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 CHSY1Q86X52 802 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 CADM4Q8NFZ8 388 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 OR2T3Q8NH03 318 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 DQX1Q8TE96 717 aaKnown RBP15.67■□□□□ 0.1
VARS-223ENST00000474643 STK32AQ8WU08 396 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 P2RY11Q96G91 374 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 ZNF419Q96HQ0 510 aaPredicted RBP15.67■□□□□ 0.1
VARS-223ENST00000474643 IRX2Q9BZI1 471 aaPredicted RBP15.67■□□□□ 0.1
VARS-223ENST00000474643 FAM204AQ9H8W3 233 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 CAPN10Q9HC96 672 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 CD248Q9HCU0 757 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 ITM2CQ9NQX7 267 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 WSB2Q9NYS7 404 aaPredicted RBP15.67■□□□□ 0.1
VARS-223ENST00000474643 USP36Q9P275 1121 aaKnown RBP15.67■□□□□ 0.1
VARS-223ENST00000474643 SUN2Q9UH99 717 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 STOML2Q9UJZ1 356 aa15.67■□□□□ 0.1
VARS-223ENST00000474643 SYNJ2BP-COX16A0A087WUM0 186 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 A0A1B0GTW7 788 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 GOLGA6L7A0A1B0GV03 622 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 E5RJQ4 531 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 SOX5P35711 763 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 UBASH3AP57075 661 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 SHC2P98077 582 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 FANCCQ00597 558 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 SFSWAPQ12872 951 aaKnown RBP15.66■□□□□ 0.1
VARS-223ENST00000474643 PDCLQ13371 301 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 NNTQ13423 1086 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 ENPP2Q13822 863 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 MPP7Q5T2T1 576 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 TMEM215Q68D42 235 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 TMEM35BQ8NCS4 154 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 C1orf131Q8NDD1 294 aaKnown RBP15.66■□□□□ 0.1
VARS-223ENST00000474643 PPP1R13BQ96KQ4 1090 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 ZDHHC5Q9C0B5 715 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 POPDC2Q9HBU9 364 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 COX16Q9P0S2 106 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 NAALADL1Q9UQQ1 740 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 NCKAP1Q9Y2A7 1128 aa15.66■□□□□ 0.1
VARS-223ENST00000474643 TNRC6BQ9UPQ9 1833 aaKnown RBP15.66■□□□□ 0.1
VARS-223ENST00000474643 CEP192Q8TEP8 1941 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 A0A1B0GTH6 734 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 IGLV3-27P01718 113 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 ASLP04424 464 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 SLC6A4P31645 630 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 CD70P32970 193 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 SGSHP51688 502 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 COPAP53621 1224 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 YWHAZP63104 245 aaKnown RBP15.65■□□□□ 0.1
VARS-223ENST00000474643 CAMK2GQ13555 558 aaPredicted RBP15.65■□□□□ 0.1
VARS-223ENST00000474643 DCAF6Q58WW2 860 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 FAM133BQ5BKY9 247 aaKnown RBP15.65■□□□□ 0.1
VARS-223ENST00000474643 ZNF776Q68DI1 518 aaPredicted RBP15.65■□□□□ 0.1
VARS-223ENST00000474643 OR6B2Q6IFH4 312 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 TAC4Q86UU9 113 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.65■□□□□ 0.1
VARS-223ENST00000474643 ATP6V0D2Q8N8Y2 350 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 MSANTD4Q8NCY6 345 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 OR2I1PQ8NGU4 316 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 AZIN2Q96A70 460 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 BTBD1Q9H0C5 482 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 SEPT11Q9NVA2 429 aaKnown RBP15.65■□□□□ 0.1
VARS-223ENST00000474643 CYTH4Q9UIA0 394 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 CHD8Q9HCK8 2581 aa15.65■□□□□ 0.1
VARS-223ENST00000474643 GON4LQ3T8J9 2241 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 FAM170AA1A519 330 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 F5H5T6 163 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 BCAT2O15382 392 aaPredicted RBP15.64■□□□□ 0.09
VARS-223ENST00000474643 CER1O95813 267 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 TPM3P06753 285 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 CCDC172P0C7W6 258 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 ABCB4P21439 1286 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 NNMTP40261 264 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 CSKP41240 450 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 JAM2P57087 298 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 RPS24P62847 133 aaKnown RBP15.64■□□□□ 0.09
VARS-223ENST00000474643 CDK17Q00537 523 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 GRIK2Q13002 908 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 HNRNPDQ14103 355 aaKnown RBP15.64■□□□□ 0.09
VARS-223ENST00000474643 TEAD4Q15561 434 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 IL27RAQ6UWB1 636 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 ADAT2Q7Z6V5 191 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms