RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 ATP11AP98196 1134 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 AUHQ13825 339 aaKnown RBP16.54■□□□□ 0.24
ITGB1-210ENST00000474568 NR1I3Q14994 352 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 ASIC2Q16515 512 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 CDO1Q16878 200 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 MAP7D1Q3KQU3 841 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 SLC25A52Q3SY17 297 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 RAB6CQ53S08 254 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 RABGAP1LQ5R372 815 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 KIAA0907Q7Z7F0 614 aaPredicted RBP16.54■□□□□ 0.24
ITGB1-210ENST00000474568 LMLNQ96KR4 655 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 IRX2Q9BZI1 471 aaPredicted RBP16.54■□□□□ 0.24
ITGB1-210ENST00000474568 RAB6CQ9H0N0 254 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 SEMA4GQ9NTN9 838 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 MBD1Q9UIS9 605 aaPredicted RBP16.54■□□□□ 0.24
ITGB1-210ENST00000474568 INTS6Q9UL03 887 aaKnown RBP16.54■□□□□ 0.24
ITGB1-210ENST00000474568 PLA2G4CQ9UP65 541 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.54■□□□□ 0.24
ITGB1-210ENST00000474568 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 A0A1W2PQC6 194 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 TMCO5BA8MYB1 307 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 I6L893 689 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-210ENST00000474568 PDGFRAP16234 1089 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 TNFAIP3P21580 790 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 TGM1P22735 817 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 CSKP41240 450 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 CTSOP43234 321 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-210ENST00000474568 DHPSP49366 369 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-210ENST00000474568 CXCR3P49682 368 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 CREB5Q02930 508 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 PTP4A2Q12974 167 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 PTPRNQ16849 979 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 C15orf59Q2T9L4 293 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-210ENST00000474568 PITRM1Q5JRX3 1037 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 E4F1Q66K89 784 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-210ENST00000474568 PMS2CLQ68D20 193 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 IRF2BP2Q7Z5L9 587 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 FAM131BQ86XD5 332 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 DNAAF5Q86Y56 855 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 TMEFF1Q8IYR6 380 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 APCDD1Q8J025 514 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 CCAR2Q8N163 923 aaKnown RBP16.53■□□□□ 0.24
ITGB1-210ENST00000474568 RXFP2Q8WXD0 754 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 ZC3H10Q96K80 434 aaKnown RBP16.53■□□□□ 0.24
ITGB1-210ENST00000474568 MRGPRX1Q96LB2 322 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 MTG2Q9H4K7 406 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 SDK1Q7Z5N4 2213 aa16.53■□□□□ 0.24
ITGB1-210ENST00000474568 MYO18AQ92614 2054 aaKnown RBP16.52■□□□□ 0.24
ITGB1-210ENST00000474568 NPC1O15118 1278 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 ATP5BP06576 529 aaKnown RBP16.52■□□□□ 0.24
ITGB1-210ENST00000474568 DLDP09622 509 aaKnown RBP16.52■□□□□ 0.24
ITGB1-210ENST00000474568 CCDC172P0C7W6 258 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 RDXP35241 583 aaKnown RBP16.52■□□□□ 0.24
ITGB1-210ENST00000474568 UBASH3AP57075 661 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 ENPP2Q13822 863 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 SF3A2Q15428 464 aaKnown RBP16.52■□□□□ 0.24
ITGB1-210ENST00000474568 BRMS1LQ5PSV4 323 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 SH3PXD2AQ5TCZ1 1133 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 SFMBT2Q5VUG0 894 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 PHF13Q86YI8 300 aaPredicted RBP16.52■□□□□ 0.24
ITGB1-210ENST00000474568 ZNF557Q8N988 423 aaPredicted RBP16.52■□□□□ 0.24
ITGB1-210ENST00000474568 NT5C3BQ969T7 300 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 SELENOOQ9BVL4 669 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 MKRN2Q9H000 416 aaKnown RBP16.52■□□□□ 0.24
ITGB1-210ENST00000474568 PRDM16Q9HAZ2 1276 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 ARHGEF38Q9NXL2 777 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 TAS2R14Q9NYV8 317 aa16.52■□□□□ 0.24
ITGB1-210ENST00000474568 KIAA1522Q9P206 1035 aaPredicted RBP16.52■□□□□ 0.24
ITGB1-210ENST00000474568 CFAP54Q96N23 3096 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 A0A1B0GVM2 712 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 TCAF2A6NFQ2 919 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 CNTN5O94779 1100 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 MOCS3O95396 460 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 F9P00740 461 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 CALB1P05937 261 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 KRT3P12035 628 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 SKILP12757 684 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 MZF1P28698 734 aaPredicted RBP16.51■□□□□ 0.23
ITGB1-210ENST00000474568 SDC4P31431 198 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 MPLP40238 635 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 BYSLQ13895 437 aaKnown RBP16.51■□□□□ 0.23
ITGB1-210ENST00000474568 CCDC14Q49A88 953 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 MON1BQ7L1V2 547 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 LPCAT2Q7L5N7 544 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 C11orf74Q86VG3 221 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 TMPRSS6Q8IU80 811 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 PGAP3Q96FM1 320 aaPredicted RBP16.51■□□□□ 0.23
ITGB1-210ENST00000474568 LOXL4Q96JB6 756 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 HAUS4Q9H6D7 363 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 IFNKQ9P0W0 207 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 MYO6Q9UM54 1294 aa16.51■□□□□ 0.23
ITGB1-210ENST00000474568 ATXN2Q99700 1313 aaKnown RBP16.5■□□□□ 0.23
ITGB1-210ENST00000474568 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.5■□□□□ 0.23
ITGB1-210ENST00000474568 IGHV1OR15-9A0A0B4J2B8 117 aa16.5■□□□□ 0.23
ITGB1-210ENST00000474568 RFC1P35251 1148 aaPredicted RBP16.5■□□□□ 0.23
ITGB1-210ENST00000474568 PTGER3P43115 390 aa16.5■□□□□ 0.23
ITGB1-210ENST00000474568 COPAP53621 1224 aa16.5■□□□□ 0.23
ITGB1-210ENST00000474568 ST8SIA6P61647 398 aa16.5■□□□□ 0.23
ITGB1-210ENST00000474568 RPL6Q02878 288 aaKnown RBP16.5■□□□□ 0.23
ITGB1-210ENST00000474568 ZNF177Q13360 481 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms