RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 DUS2Q9NX74 493 aaKnown RBP10.66□□□□□ -0.7
COL12A1-206ENST00000474564 STOML2Q9UJZ1 356 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 ZNF148Q9UQR1 794 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 USP15Q9Y4E8 981 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-206ENST00000474564 HEY1Q9Y5J3 304 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 GREB1Q4ZG55 1949 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 A0A1B0GVM2 712 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 CFAP69A5D8W1 941 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 TCAF2A6NFQ2 919 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 ARHGAP42A6NI28 874 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 C3orf70A6NLC5 250 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 DRGXA6NNA5 263 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 H7C0C1 242 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 NDC80O14777 642 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 MTSS1O43312 755 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 TSPAN3O60637 253 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 GAS8O95995 478 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 CD48P09326 243 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 MCM3P25205 808 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 LTBRP36941 435 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 ATP5OP48047 213 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 NDST2P52849 883 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 EIF3EP60228 445 aaKnown RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 DLX2Q07687 328 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 MMRN1Q13201 1228 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 XRCC4Q13426 336 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 CDH18Q13634 790 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 E2F5Q15329 346 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 LLGL1Q15334 1064 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 ELF2Q15723 593 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 TAZQ16635 292 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 ANO4Q32M45 955 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 PIK3R6Q5UE93 754 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 DCAF12L1Q5VU92 463 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 TIGD7Q6NT04 549 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 C8orf74Q6P047 294 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 FBXL22Q6P050 247 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 DARS2Q6PI48 645 aaKnown RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 C1orf228Q6PIY5 440 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 CYP4V2Q6ZWL3 525 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 Q7L0L9 218 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 CDKL3Q8IVW4 592 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 CCDC105Q8IYK2 499 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 CPA6Q8N4T0 437 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 RTL3Q8N8U3 475 aaKnown RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 CCNYQ8ND76 341 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 PCDH19Q8TAB3 1148 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 CCHCR1Q8TD31 782 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 RSAD2Q8WXG1 361 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 TSC1Q92574 1164 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 ATP2A3Q93084 1043 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 ELSPBP1Q96BH3 223 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 FAF2Q96CS3 445 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 ZSWIM3Q96MP5 696 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 XPO6Q96QU8 1125 aaKnown RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 SMG9Q9H0W8 520 aaKnown RBP10.65□□□□□ -0.7
COL12A1-206ENST00000474564 ARHGEF4Q9NR80 690 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 TMPRSS4Q9NRS4 437 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 MTMR10Q9NXD2 777 aa10.65□□□□□ -0.7
COL12A1-206ENST00000474564 PDE4DIPQ5VU43 2346 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 MKI67P46013 3256 aaKnown RBP10.64□□□□□ -0.71
COL12A1-206ENST00000474564 CEP290O15078 2479 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 IGLV3-10A0A075B6K4 115 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 GOLGA6L7A0A1B0GV03 622 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 HEPACAM2A8MVW5 462 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 WASH4PA8MWX3 477 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 HACD1B0YJ81 288 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 H3BQ06 376 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-206ENST00000474564 RAMP2O60895 175 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 TBL1XO60907 577 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 PHF2O75151 1096 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 ECI2O75521 394 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 KLKB1P03952 638 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 RHOXF2BP0C7M4 288 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 PSMC3P17980 439 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 STIP1P31948 543 aaKnown RBP10.64□□□□□ -0.71
COL12A1-206ENST00000474564 GAD2Q05329 585 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 USP4Q13107 963 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 SEMA3BQ13214 749 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 SLC12A1Q13621 1099 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 DPYSQ14117 519 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 POLD3Q15054 466 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-206ENST00000474564 PAFAH1B3Q15102 231 aaKnown RBP10.64□□□□□ -0.71
COL12A1-206ENST00000474564 ZNF77Q15935 545 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 ERCC6LQ2NKX8 1250 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 PARP15Q460N3 678 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 GLE1Q53GS7 698 aaKnown RBP10.64□□□□□ -0.71
COL12A1-206ENST00000474564 SLC9A4Q6AI14 798 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 C4orf22Q6V702 233 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 ZNF783Q6ZMS7 281 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 Q6ZNB5 142 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 SYDE1Q6ZW31 735 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-206ENST00000474564 SETD3Q86TU7 594 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-206ENST00000474564 MFSD6LQ8IWD5 586 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 BBS7Q8IWZ6 715 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 BBS5Q8N3I7 341 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 PLD5Q8N7P1 536 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 SPATA4Q8NEY3 305 aa10.64□□□□□ -0.71
COL12A1-206ENST00000474564 ATL2Q8NHH9 583 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms