RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 IDSP22304 550 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 GLRA2P23416 452 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 MZF1P28698 734 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 MAGEA11P43364 429 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 GPR1P46091 355 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CLCN6P51797 869 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 SMAD3P84022 425 aaKnown RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 LRRC74AQ0VAA2 488 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ITGADQ13349 1161 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 C11orf88Q6PI97 169 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 SZRD1Q7Z422 152 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 LCA5Q86VQ0 697 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 NUDCD3Q8IVD9 361 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PPM1NQ8N819 430 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 HCAR2Q8TDS4 363 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ARNTL2Q8WYA1 636 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 LRIG1Q96JA1 1093 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF599Q96NL3 588 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 IER2Q9BTL4 223 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PNPLA8Q9NP80 782 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 RAB6BQ9NRW1 208 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ENTPD4Q9Y227 616 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PCDHB1Q9Y5F3 818 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 A0A087X1B8 175 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SUPT3HB4E1H0 165 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 C9J4A7 227 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 LILRB3O75022 631 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 AGTP01019 485 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SLC35G4P0C7Q5 338 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PRLRP16471 622 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SMPD1P17405 629 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 TNNI3P19429 210 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 OGNP20774 298 aaKnown RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 AGXTP21549 392 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CST5P28325 142 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 LIG3P49916 1009 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PMS2P54278 862 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 GALCP54803 685 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 MSLNQ13421 630 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 EIF4HQ15056 248 aaKnown RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 COLEC12Q5KU26 742 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 TREML2Q5T2D2 321 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF783Q6ZMS7 281 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 GET4Q7L5D6 327 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 POLNQ7Z5Q5 900 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 HERVK_113Q902F9 699 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ANKRD7Q92527 254 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RAB7BQ96AH8 199 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CLMNQ96JQ2 1002 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 MLPHQ9BV36 600 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 HERC2P3Q9BVR0 1158 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SLC13A1Q9BZW2 595 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RRAGDQ9NQL2 400 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CLDND1Q9NY35 253 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 H2AFY2Q9P0M6 372 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 TMEM63CQ9P1W3 806 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CTNNAL1Q9UBT7 734 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RAPGEFL1Q9UHV5 662 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PHF24Q9UPV7 400 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CASZ1Q86V15 1759 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 YDJCA8MPS7 323 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SLC37A4O43826 429 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 POP4O95707 220 aaKnown RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SERPIND1P05546 499 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 NTSP30990 170 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 TRIP4Q15650 581 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 GLRA4Q5JXX5 417 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 MFSD4BQ5TF39 518 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 BROXQ5VW32 411 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 IL27RAQ6UWB1 636 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SV2AQ7L0J3 742 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 GKN2Q86XP6 184 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ECHDC2Q86YB7 292 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 COLGALT2Q8IYK4 626 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SMYD4Q8IYR2 804 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 FAM98AQ8NCA5 519 aaKnown RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CFAP61Q8NHU2 1237 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF296Q8WUU4 475 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 BTN2A2Q8WVV5 523 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 METTL21AQ8WXB1 218 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PLEKHA8Q96JA3 519 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 IL12RB2Q99665 862 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CEP44Q9C0F1 390 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 KLHL4Q9C0H6 718 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PDGFDQ9GZP0 370 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ZDHHC7Q9NXF8 308 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 IGSF9Q9P2J2 1179 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 LZTS1Q9Y250 596 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 NID2Q14112 1375 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 TMEM265A0A087WTH1 108 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 C15orf38-AP3S2A0A0A6YYH1 394 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 A0A1B0GVM2 712 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 TCAF2A6NFQ2 919 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CST8O60676 142 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 FTCDO95954 541 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ALPIP09923 528 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RHOQP17081 205 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SERPINB1P30740 379 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 OR1D2P34982 312 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms