RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.22■□□□□ 0.67
COL7A1-209ENST00000474432 NFE2L3Q9Y4A8 694 aa19.22■□□□□ 0.67
COL7A1-209ENST00000474432 SLCO1B1Q9Y6L6 691 aa19.22■□□□□ 0.67
COL7A1-209ENST00000474432 NYNRINQ9P2P1 1898 aaKnown RBP19.22■□□□□ 0.67
COL7A1-209ENST00000474432 HSF2BPO75031 334 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 GJB3O75712 270 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 APOEP02649 317 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 CEACAM1P13688 526 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 ACSL1P33121 698 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 CDH5P33151 784 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-209ENST00000474432 SHC2P98077 582 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 GFPT1Q06210 699 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-209ENST00000474432 DRAP1Q14919 205 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-209ENST00000474432 PITRM1Q5JRX3 1037 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 EFHC1Q5JVL4 640 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 RBM43Q6ZSC3 357 aaKnown RBP19.21■□□□□ 0.67
COL7A1-209ENST00000474432 C11orf57Q6ZUT1 292 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-209ENST00000474432 RABEPKQ7Z6M1 372 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 RGL4Q8IZJ4 473 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 APCDD1Q8J025 514 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 ZNF557Q8N988 423 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-209ENST00000474432 DEFB124Q8NES8 71 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 KNL1Q8NG31 2342 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 GPT2Q8TD30 523 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 NUP58Q9BVL2 599 aa19.21■□□□□ 0.67
COL7A1-209ENST00000474432 UPK3BL1B0FP48 263 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 UPK3BL2E5RIL1 263 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 IRAK1P51617 712 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 CDK17Q00537 523 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 BNC1Q01954 994 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 SLC6A3Q01959 620 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 ARID5BQ14865 1188 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 TCP11X2Q5H9J9 407 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 CT47A1Q5JQC4 288 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-209ENST00000474432 WDR45BQ5MNZ6 344 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 SYCP2LQ5T4T6 812 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 DCAF12L1Q5VU92 463 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 OR6B2Q6IFH4 312 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 SLC26A9Q7LBE3 791 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 FAM124AQ86V42 546 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 CHSY1Q86X52 802 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 MINDY1Q8N5J2 469 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 ZNF397Q8NF99 534 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-209ENST00000474432 GTPBP2Q9BX10 602 aaKnown RBP19.2■□□□□ 0.66
COL7A1-209ENST00000474432 RSPH9Q9H1X1 276 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-209ENST00000474432 C6orf106Q9H6K1 298 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-209ENST00000474432 ANLNQ9NQW6 1124 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 DNAAF2Q9NVR5 837 aaKnown RBP19.2■□□□□ 0.66
COL7A1-209ENST00000474432 DDIT4Q9NX09 232 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 DACH1Q9UI36 760 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 ERVW-1Q9UQF0 538 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 USP24Q9UPU5 2620 aa19.2■□□□□ 0.66
COL7A1-209ENST00000474432 I6L893 689 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-209ENST00000474432 SIN3BO75182 1162 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 DAB1O75553 588 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 ASLP04424 464 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 ACADMP11310 421 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 CD59P13987 128 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 CYP11B1P15538 503 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 TFE3P19532 575 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-209ENST00000474432 KRT9P35527 623 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 CDH18Q13634 790 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 HNRNPA1L2Q32P51 320 aaKnown RBP19.19■□□□□ 0.66
COL7A1-209ENST00000474432 PLEKHG6Q3KR16 790 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 C9orf64Q5T6V5 341 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 CDKAL1Q5VV42 579 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 CIR1Q86X95 450 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-209ENST00000474432 ATP6V0D2Q8N8Y2 350 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 KDM1BQ8NB78 822 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 ENOX1Q8TC92 643 aaKnown RBP19.19■□□□□ 0.66
COL7A1-209ENST00000474432 IGSF8Q969P0 613 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 FAM204AQ9H8W3 233 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 FBRSQ9HAH7 460 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 KIAA1522Q9P206 1035 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-209ENST00000474432 SUSD2Q9UGT4 822 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 SUN2Q9UH99 717 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 SLCO3A1Q9UIG8 710 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 ANGPTL2Q9UKU9 493 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 CACNA1BQ00975 2339 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 ITIH6Q6UXX5 1313 aa19.19■□□□□ 0.66
COL7A1-209ENST00000474432 SYNJ2BP-COX16A0A087WUM0 186 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 TYW5A2RUC4 315 aaKnown RBP19.18■□□□□ 0.66
COL7A1-209ENST00000474432 TTC34A8MYJ7 566 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 C10orf142B7Z368 130 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 UCHL3P15374 230 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 EEF1GP26641 437 aaKnown RBP19.18■□□□□ 0.66
COL7A1-209ENST00000474432 CCR1P32246 355 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 GABRB2P47870 512 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 ZBTB16Q05516 673 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 ZNF252P-AS1Q0IIN9 211 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 RAPGEF1Q13905 1077 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 ARTNQ5T4W7 220 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 CXorf57Q6NSI4 855 aaKnown RBP19.18■□□□□ 0.66
COL7A1-209ENST00000474432 FBXL22Q6P050 247 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 CCAR2Q8N163 923 aaKnown RBP19.18■□□□□ 0.66
COL7A1-209ENST00000474432 ZCCHC9Q8N567 271 aaKnown RBP19.18■□□□□ 0.66
COL7A1-209ENST00000474432 OR52K2Q8NGK3 314 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 NT5C3BQ969T7 300 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 ALG14Q96F25 216 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 NPY6RQ99463 290 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms