RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RRM2BQ7LG56 351 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 DIS3L2Q8IYB7 885 aaKnown RBP4.65□□□□□ -1.67
BRCA1-212ENST00000473961 NGEFQ8N5V2 710 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 C12orf76Q8N812 135 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-212ENST00000473961 ETNPPLQ8TBG4 499 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 NCSTNQ92542 709 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 LENG9Q96B70 501 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 CTHRC1Q96CG8 243 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 SAAL1Q96ER3 474 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 MASTLQ96GX5 879 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 HS6ST2Q96MM7 605 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 WWC2-AS2Q96NR7 200 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 BARD1Q99728 777 aaKnown RBP4.65□□□□□ -1.67
BRCA1-212ENST00000473961 CLPBQ9H078 707 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 SFXN1Q9H9B4 322 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 DKK2Q9UBU2 259 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 SLC25A13Q9UJS0 675 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 ASAP1Q9ULH1 1129 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 CNPY2Q9Y2B0 182 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 SLC45A1Q9Y2W3 748 aa4.65□□□□□ -1.67
BRCA1-212ENST00000473961 PIPSLA2A3N6 862 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 WDR27A2RRH5 827 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 GCOM1H8Y6P7 765 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-212ENST00000473961 GTPBP1O00178 669 aaKnown RBP4.64□□□□□ -1.67
BRCA1-212ENST00000473961 HBP1O60381 514 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 GFPT2O94808 682 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 CYP21A2P08686 494 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 ACP5P13686 325 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 CTGFP29279 349 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 CYP2C18P33260 490 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 DIO1P49895 249 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 FAM3BP58499 235 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-212ENST00000473961 CDK18Q07002 472 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 PTPAQ15257 358 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 CNGA3Q16281 694 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 TXNRD1Q16881 649 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 LRRC24Q50LG9 513 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 USP39Q53GS9 565 aaKnown RBP4.64□□□□□ -1.67
BRCA1-212ENST00000473961 SLC45A4Q5BKX6 768 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 GPATCH4Q5T3I0 446 aaKnown RBP4.64□□□□□ -1.67
BRCA1-212ENST00000473961 ZNF280DQ6N043 979 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 SLC22A25Q6T423 547 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 KLHL24Q6TFL4 600 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 C16orf89Q6UX73 402 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 SLC39A5Q6ZMH5 540 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 CCDC105Q8IYK2 499 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 ADSSL1Q8N142 457 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 LCORLQ8N3X6 602 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 ANKRD52Q8NB46 1076 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 LSM14AQ8ND56 463 aaKnown RBP4.64□□□□□ -1.67
BRCA1-212ENST00000473961 AKAP1Q92667 903 aaKnown RBP eCLIP4.64□□□□□ -1.67
BRCA1-212ENST00000473961 ERP27Q96DN0 273 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 KIF1BPQ96EK5 621 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 TRMT61AQ96FX7 289 aaKnown RBP4.64□□□□□ -1.67
BRCA1-212ENST00000473961 Q96MF0 132 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 C5orf34Q96MH7 638 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 ADGRE3Q9BY15 652 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 TRIM2Q9C040 744 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 PRDM13Q9H4Q3 707 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 SYNCQ9H7C4 482 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 SAP30LQ9HAJ7 183 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 EIF2B3Q9NR50 452 aaKnown RBP4.64□□□□□ -1.67
BRCA1-212ENST00000473961 DUSP22Q9NRW4 184 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 THAP1Q9NVV9 213 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 CLIC5Q9NZA1 410 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 CEP72Q9P209 647 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 TBC1D14Q9P2M4 693 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 LRIT1Q9P2V4 623 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 NRBP1Q9UHY1 535 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 ST6GALNAC2Q9UJ37 374 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 CD207Q9UJ71 328 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 VPS4AQ9UN37 437 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 GPR34Q9UPC5 381 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 TSC22D4Q9Y3Q8 395 aa4.64□□□□□ -1.67
BRCA1-212ENST00000473961 TTC36A6NLP5 189 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 DHX16O60231 1041 aaKnown RBP4.63□□□□□ -1.67
BRCA1-212ENST00000473961 ERBB2P04626 1255 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 CLEC3BP05452 202 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 HKR1P10072 659 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 EGR2P11161 476 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-212ENST00000473961 CYP4B1P13584 511 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 ENGP17813 658 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 IGFBP2P18065 325 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 GALNSP34059 522 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 CCT4P50991 539 aaKnown RBP4.63□□□□□ -1.67
BRCA1-212ENST00000473961 CDH15P55291 814 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 EEFSECP57772 596 aaKnown RBP4.63□□□□□ -1.67
BRCA1-212ENST00000473961 FOXL2P58012 376 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 RAE1P78406 368 aaKnown RBP4.63□□□□□ -1.67
BRCA1-212ENST00000473961 CFHR3Q02985 330 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 DEUP1Q05D60 604 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 NAA25Q14CX7 972 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 SMN1Q16637 294 aaKnown RBP4.63□□□□□ -1.67
BRCA1-212ENST00000473961 GXYLT1Q4G148 440 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 VSTM1Q6UX27 236 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 IL17DQ8TAD2 202 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 PROKR1Q8TCW9 393 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 SLC9A6Q92581 669 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 KCNJ9Q92806 393 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 RFKQ969G6 155 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms