RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 GPR150Q8NGU9 434 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PPP1R14CQ8TAE6 165 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 NTN5Q8WTR8 489 aaPredicted RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 NUP133Q8WUM0 1156 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 CASKIN2Q8WXE0 1202 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 NMD3Q96D46 503 aaKnown RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 MOGAT1Q96PD6 335 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 DMRTA2Q96SC8 542 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 SEC62Q99442 399 aaKnown RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 PRPF18Q99633 342 aaKnown RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 SENP7Q9BQF6 1050 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 MRI1Q9BV20 369 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 SLC26A6Q9BXS9 759 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 IMPG2Q9BZV3 1241 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 MS4A7Q9GZW8 240 aaPredicted RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 KIAA1683Q9H0B3 1180 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 BRD8Q9H0E9 1235 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 OR10A2Q9H208 303 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 MFSD1Q9H3U5 465 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 SMOC2Q9H3U7 446 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 TDRD3Q9H7E2 651 aaKnown RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 ITM2CQ9NQX7 267 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 TM7SF3Q9NS93 570 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 MAP3K20Q9NYL2 800 aaKnown RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 MYO1AQ9UBC5 1043 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 GRHPRQ9UBQ7 328 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 TRPS1Q9UHF7 1281 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 LRRFIP2Q9Y608 721 aaKnown RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 COL12A1Q99715 3063 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 DOPEY2Q9Y3R5 2298 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 NOTCH2Q04721 2471 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 UMODL1Q5DID0 1318 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PCNX1Q96RV3 2341 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 NLRC5Q86WI3 1866 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 RFX7Q2KHR2 1363 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 ZNFX1Q9P2E3 1918 aaKnown RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 A0A1W2PPC4 97 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 A0A1W2PRX2 142 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 DYTNA2CJ06 578 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 FAM234BA2RU67 622 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 C2orf78A6NCI8 922 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 PRRT4C9JH25 899 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 M0QYG6 137 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 LRP3O75074 770 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 COQ9O75208 318 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 VPS4BO75351 444 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 USP1O94782 785 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 KCNK5O95279 499 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 RASAL1O95294 804 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 HOXC6P09630 235 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 SNRPA1P09661 255 aaKnown RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 SRGAP2BP0DMP2 458 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 ATF7P17544 494 aaPredicted RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 TPH1P17752 444 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 TNFAIP3P21580 790 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 PDIA3P30101 505 aaKnown RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 RPS19P39019 145 aaKnown RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 GZMKP49863 264 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 ZNF135P52742 658 aaPredicted RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 RBM5P52756 815 aaKnown RBP eCLIP2.62□□□□□ -1.99
CALD1-216ENST00000473714 LIMK1P53667 647 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 UCP3P55916 312 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 POLE2P56282 527 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 ARL4CP56559 192 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 FKBP1AP62942 108 aaKnown RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 KRT17Q04695 432 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 TOP3AQ13472 1001 aaPredicted RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 SPARCL1Q14515 664 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 POSTNQ15063 836 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 MTHFSDQ2M296 383 aaKnown RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 FAM47AQ5JRC9 791 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 TREML2Q5T2D2 321 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 UTP14CQ5TAP6 766 aaKnown RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 ATPAF1Q5TC12 328 aaPredicted RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 CACHD1Q5VU97 1274 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 KIF6Q6ZMV9 814 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 MICALCLQ6ZW33 695 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 USP30Q70CQ3 517 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 USP37Q86T82 979 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 FAM90A1Q86YD7 464 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 TMPRSS6Q8IU80 811 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 CMTM4Q8IZR5 234 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 IL17RDQ8NFM7 739 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 TBC1D15Q8TC07 691 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 IPO4Q8TEX9 1081 aaKnown RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 HOXB13Q92826 284 aaPredicted RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 USP13Q92995 863 aaPredicted RBP2.62□□□□□ -1.99
CALD1-216ENST00000473714 SPSB4Q96A44 273 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 MSLNLQ96KJ4 702 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 RPGRIP1Q96KN7 1286 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 MRGPRX1Q96LB2 322 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 UBXN10Q96LJ8 280 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 PPP1R9BQ96SB3 815 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 DPYSL5Q9BPU6 564 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 CNPPD1Q9BV87 410 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 PLA2G12BQ9BX93 195 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 STK33Q9BYT3 514 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 TRIM54Q9BYV2 358 aa2.62□□□□□ -1.99
CALD1-216ENST00000473714 REXO4Q9GZR2 422 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms