RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 SMOC1Q9H4F8 434 aa16.13■□□□□ 0.17
MRPL55-226ENST00000473066 FBRSQ9HAH7 460 aa16.13■□□□□ 0.17
MRPL55-226ENST00000473066 TMEM51Q9NW97 253 aa16.13■□□□□ 0.17
MRPL55-226ENST00000473066 KIAA1522Q9P206 1035 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-226ENST00000473066 XPO7Q9UIA9 1087 aaKnown RBP16.13■□□□□ 0.17
MRPL55-226ENST00000473066 NOCTQ9UK39 431 aaKnown RBP16.13■□□□□ 0.17
MRPL55-226ENST00000473066 IGHV1OR15-9A0A0B4J2B8 117 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 A0A1B0GVM2 712 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 FAM170AA1A519 330 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 TCAF2A6NFQ2 919 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 KHNYNO15037 678 aaKnown RBP16.12■□□□□ 0.17
MRPL55-226ENST00000473066 EPHB6O15197 1021 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 F9P00740 461 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 CCDC172P0C7W6 258 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 HLA-EP13747 358 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 OXCT1P55809 520 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 TPM4P67936 248 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 FOXK2Q01167 660 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 DEUP1Q05D60 604 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 BRMS1LQ5PSV4 323 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 KIAA0907Q7Z7F0 614 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-226ENST00000473066 ADIPOR2Q86V24 386 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 XYLT1Q86Y38 959 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 TMPRSS6Q8IU80 811 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 SLC20A1Q8WUM9 679 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 CPA5Q8WXQ8 436 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 EDEM2Q9BV94 578 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 CD248Q9HCU0 757 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 SEPT11Q9NVA2 429 aaKnown RBP16.12■□□□□ 0.17
MRPL55-226ENST00000473066 MBD1Q9UIS9 605 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-226ENST00000473066 DOCK4Q8N1I0 1966 aa16.12■□□□□ 0.17
MRPL55-226ENST00000473066 SLC30A4O14863 429 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 ATP1A3P13637 1013 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 CSKP41240 450 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 NSFP46459 744 aaKnown RBP16.11■□□□□ 0.17
MRPL55-226ENST00000473066 ZNF165P49910 485 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 PITRM1Q5JRX3 1037 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 RABEPKQ7Z6M1 372 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 FRMD1Q8N878 549 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 ZNF366Q8N895 744 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 OR2T3Q8NH03 318 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 MYEOVQ96EZ4 313 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 PPP1R9BQ96SB3 815 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 NPY6RQ99463 290 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 WDCPQ9H6R7 721 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 SUN2Q9UH99 717 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 ADAMTS9Q9P2N4 1935 aa16.11■□□□□ 0.17
MRPL55-226ENST00000473066 LRRC10BA6NIK2 292 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 GDF9O60383 454 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 CD6P30203 668 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 OXTRP30559 389 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 HOXD12P35452 270 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 NNMTP40261 264 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 PTGER3P43115 390 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 FMO1Q01740 532 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 EIF4EBP2Q13542 120 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-226ENST00000473066 CAMK2GQ13555 558 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-226ENST00000473066 SLC12A1Q13621 1099 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 KLHL40Q2TBA0 621 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 SLC25A52Q3SY17 297 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 TTC31Q49AM3 519 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-226ENST00000473066 TCEAL6Q6IPX3 200 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 LRSAM1Q6UWE0 723 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 MMS22LQ6ZRQ5 1243 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 METTL3Q86U44 580 aaKnown RBP16.1■□□□□ 0.17
MRPL55-226ENST00000473066 SYT12Q8IV01 421 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 CCAR2Q8N163 923 aaKnown RBP16.1■□□□□ 0.17
MRPL55-226ENST00000473066 FOXJ1Q92949 421 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 TCEAL3Q969E4 200 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 TTC17Q96AE7 1141 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 HSPA12BQ96MM6 686 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 TBCBQ99426 244 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 C11orf70Q9BRQ4 267 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 NUSAP1Q9BXS6 441 aaKnown RBP16.1■□□□□ 0.17
MRPL55-226ENST00000473066 MKRN2Q9H000 416 aaKnown RBP16.1■□□□□ 0.17
MRPL55-226ENST00000473066 SIK2Q9H0K1 926 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 TMEM245Q9H330 911 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 METTL5Q9NRN9 209 aaKnown RBP16.1■□□□□ 0.17
MRPL55-226ENST00000473066 PIGVQ9NUD9 493 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 VANGL2Q9ULK5 521 aa16.1■□□□□ 0.17
MRPL55-226ENST00000473066 ATXN2Q99700 1313 aaKnown RBP16.1■□□□□ 0.17
MRPL55-226ENST00000473066 MEI4A8MW99 385 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 PAGE1O75459 146 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 CYP1A1P04798 512 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-226ENST00000473066 SRPRAP08240 638 aaKnown RBP16.09■□□□□ 0.17
MRPL55-226ENST00000473066 FERP16591 822 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 LIMK1P53667 647 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 ATXN1P54253 815 aaKnown RBP16.09■□□□□ 0.17
MRPL55-226ENST00000473066 ZNF33AQ06730 810 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 AUHQ13825 339 aaKnown RBP16.09■□□□□ 0.17
MRPL55-226ENST00000473066 PLEKHG6Q3KR16 790 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 C2CD6Q53TS8 623 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 TRIM61Q5EBN2 209 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 SYCP2LQ5T4T6 812 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 ACBD5Q5T8D3 534 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-226ENST00000473066 FBXL22Q6P050 247 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 LRRC31Q6UY01 552 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 CIR1Q86X95 450 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-226ENST00000473066 RGL4Q8IZJ4 473 aa16.09■□□□□ 0.17
MRPL55-226ENST00000473066 DEFB119Q8N690 84 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms