RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CCP110O43303 1012 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 TBL1XO60907 577 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 ADAM23O75077 832 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 HLA-FP30511 346 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 CCR1P32246 355 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 GBP1P32455 592 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 GRIA2P42262 883 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 PTPN9P43378 593 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 SLC11A2P49281 568 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 DEUP1Q05D60 604 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 GFPT1Q06210 699 aaPredicted RBP13.57□□□□□ -0.24
TPM3-216ENST00000473036 CCDC173Q0VFZ6 552 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 MAPK8IP2Q13387 824 aaPredicted RBP13.57□□□□□ -0.24
TPM3-216ENST00000473036 ST3GAL2Q16842 350 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 CDO1Q16878 200 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 MPPE1Q53F39 396 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 C2orf27AQ580R0 203 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 FSCBQ5H9T9 825 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 GRAMD4Q6IC98 578 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 FBXL22Q6P050 247 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 DNAJC24Q6P3W2 148 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 KIAA0907Q7Z7F0 614 aaPredicted RBP13.57□□□□□ -0.24
TPM3-216ENST00000473036 FAM131BQ86XD5 332 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 SYNPOQ8N3V7 929 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 SPEM1Q8N4L4 309 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 TMA16Q96EY4 203 aaKnown RBP13.57□□□□□ -0.24
TPM3-216ENST00000473036 ACOX2Q99424 681 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.57□□□□□ -0.24
TPM3-216ENST00000473036 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 PACSIN1Q9BY11 444 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 ZNHIT6Q9NWK9 470 aaKnown RBP13.57□□□□□ -0.24
TPM3-216ENST00000473036 STAP1Q9ULZ2 295 aa13.57□□□□□ -0.24
TPM3-216ENST00000473036 BZW2Q9Y6E2 419 aaKnown RBP13.57□□□□□ -0.24
TPM3-216ENST00000473036 CFAP47Q6ZTR5 3102 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 USP24Q9UPU5 2620 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 TMEM191CA6NGB0 347 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.56□□□□□ -0.24
TPM3-216ENST00000473036 CHURC1-FNTBB4DL54 471 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 PAPSS2O95340 614 aaPredicted RBP13.56□□□□□ -0.24
TPM3-216ENST00000473036 APOEP02649 317 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 APODP05090 189 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 GPD1P21695 349 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 CD70P32970 193 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 RDXP35241 583 aaKnown RBP13.56□□□□□ -0.24
TPM3-216ENST00000473036 TNFRSF4P43489 277 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 DGKGP49619 791 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 ZNF143P52747 638 aaPredicted RBP13.56□□□□□ -0.24
TPM3-216ENST00000473036 AUHQ13825 339 aaKnown RBP13.56□□□□□ -0.24
TPM3-216ENST00000473036 C5orf22Q49AR2 442 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 EGFLAMQ63HQ2 1017 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 TMEM92Q6UXU6 159 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 LGI2Q8N0V4 545 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 CCDC185Q8N715 623 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 ATP6V0D2Q8N8Y2 350 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 IL17RCQ8NAC3 791 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 OR52K2Q8NGK3 314 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 FAM172AQ8WUF8 416 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 XPO6Q96QU8 1125 aaKnown RBP13.56□□□□□ -0.24
TPM3-216ENST00000473036 THAP2Q9H0W7 228 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 WDCPQ9H6R7 721 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 CD248Q9HCU0 757 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 STIM2Q9P246 746 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 CNOT8Q9UFF9 292 aaKnown RBP13.56□□□□□ -0.24
TPM3-216ENST00000473036 INTS6Q9UL03 887 aaKnown RBP13.56□□□□□ -0.24
TPM3-216ENST00000473036 SLC27A6Q9Y2P4 619 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 STARD13Q9Y3M8 1113 aa13.56□□□□□ -0.24
TPM3-216ENST00000473036 TBC1D3BA6NDS4 549 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 AKR1B15C9JRZ8 316 aaPredicted RBP13.55□□□□□ -0.24
TPM3-216ENST00000473036 FAM72CH0Y354 149 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 SGK1O00141 431 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 CNTN5O94779 1100 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 ABCB4P21439 1286 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 SDC4P31431 198 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 TIE1P35590 1138 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 CSRP2Q16527 193 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 ALFQ53S48 1182 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 BRMS1LQ5PSV4 323 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 C10orf76Q5T2E6 689 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 MPP7Q5T2T1 576 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 FAM72AQ5TYM5 149 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 DAB2IPQ5VWQ8 1189 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 FAM72DQ6L9T8 149 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 ALKBH5Q6P6C2 394 aaKnown RBP13.55□□□□□ -0.24
TPM3-216ENST00000473036 CYP4V2Q6ZWL3 525 aaPredicted RBP13.55□□□□□ -0.24
TPM3-216ENST00000473036 STRADAQ7RTN6 431 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 ADIPOR2Q86V24 386 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 CHSY1Q86X52 802 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 FAM72BQ86X60 149 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 CPNE8Q86YQ8 564 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 CCDC33Q8N5R6 958 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 ALLCQ8N6M5 410 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.55□□□□□ -0.24
TPM3-216ENST00000473036 SORCS1Q8WY21 1168 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 RNF34Q969K3 372 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 ZNF653Q96CK0 615 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 SIK2Q9H0K1 926 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 PARD6AQ9NPB6 346 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 PARVAQ9NVD7 372 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 ZNF212Q9UDV6 495 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 VANGL2Q9ULK5 521 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms