RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ASLP04424 464 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 ACSL1P33121 698 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 MTIF2P46199 727 aaKnown RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 PITX1P78337 314 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 GRIK2Q13002 908 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 CDH18Q13634 790 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 HNRNPDQ14103 355 aaKnown RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 CCDC117Q8IWD4 279 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 LGI2Q8N0V4 545 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 ZCCHC9Q8N567 271 aaKnown RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 PPP1R13BQ96KQ4 1090 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 SLC2A13Q96QE2 648 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 CPXM1Q96SM3 734 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 MIR1-1HGQ9H1L0 117 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 RSPH9Q9H1X1 276 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 CLSTN2Q9H4D0 955 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 C6orf106Q9H6K1 298 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 ASNSD1Q9NWL6 643 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 KIAA1522Q9P206 1035 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 EIF2B4Q9UI10 523 aaKnown RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 DNAJC12Q9UKB3 198 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 ADAMTS9Q9P2N4 1935 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 PCNX2A6NKB5 2137 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 SPAARA0A1B0GVQ0 90 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 KCNU1A8MYU2 1149 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 FOXN3O00409 490 aaPredicted RBP15.82■□□□□ 0.12
VTI1A-203ENST00000472892 TOP3BO95985 862 aaKnown RBP15.82■□□□□ 0.12
VTI1A-203ENST00000472892 DNTTP04053 509 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 TACR2P21452 398 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 CLCN1P35523 988 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 ST8SIA6P61647 398 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 CDK17Q00537 523 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 PTK2Q05397 1052 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 MAN2A1Q16706 1144 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 HNRNPA1L2Q32P51 320 aaKnown RBP15.82■□□□□ 0.12
VTI1A-203ENST00000472892 PITRM1Q5JRX3 1037 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 EFHC1Q5JVL4 640 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 RAP1GAP2Q684P5 730 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 DPY19L2P1Q6NXN4 242 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 MMS22LQ6ZRQ5 1243 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 DEFB106AQ8N104 65 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 PRMT1Q99873 361 aaKnown RBP15.82■□□□□ 0.12
VTI1A-203ENST00000472892 BTBD1Q9H0C5 482 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 MTG2Q9H4K7 406 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 SLC12A6Q9UHW9 1150 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 AJAP1Q9UKB5 411 aaPredicted RBP15.82■□□□□ 0.12
VTI1A-203ENST00000472892 ERVW-1Q9UQF0 538 aa15.82■□□□□ 0.12
VTI1A-203ENST00000472892 MAP1BP46821 2468 aaKnown RBP15.82■□□□□ 0.12
VTI1A-203ENST00000472892 H0Y626 953 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 HSF2BPO75031 334 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 SEMA4FO95754 770 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 SRPRAP08240 638 aaKnown RBP15.81■□□□□ 0.12
VTI1A-203ENST00000472892 SLC2A3P11169 496 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 ERCC5P28715 1186 aaPredicted RBP15.81■□□□□ 0.12
VTI1A-203ENST00000472892 FAM193AP78312 1265 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 SIM1P81133 766 aaPredicted RBP15.81■□□□□ 0.12
VTI1A-203ENST00000472892 CACNA1BQ00975 2339 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 BNC1Q01954 994 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 TPD52L1Q16890 204 aaPredicted RBP15.81■□□□□ 0.12
VTI1A-203ENST00000472892 VWA3BQ502W6 1294 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 C9orf64Q5T6V5 341 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 ZNF776Q68DI1 518 aaPredicted RBP15.81■□□□□ 0.12
VTI1A-203ENST00000472892 FAM114A1Q8IWE2 563 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 ATP6V0D2Q8N8Y2 350 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 NOX5Q96PH1 765 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 NDST4Q9H3R1 872 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 SGK2Q9HBY8 427 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 OSGEPQ9NPF4 335 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 SCML1Q9UN30 329 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.81■□□□□ 0.12
VTI1A-203ENST00000472892 CEP295Q9C0D2 2601 aa15.81■□□□□ 0.12
VTI1A-203ENST00000472892 CACNA1EQ15878 2313 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 TARSL2A2RTX5 802 aaKnown RBP15.8■□□□□ 0.12
VTI1A-203ENST00000472892 F5H5T6 163 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 SH3BP5O60239 455 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 SIN3BO75182 1162 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 MOCS3O95396 460 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 PROS1P07225 676 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 ZNF883P0CG24 379 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 SPINK2P20155 84 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 CCR1P32246 355 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 KRT9P35527 623 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 CTSOP43234 321 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-203ENST00000472892 PLK1P53350 603 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 SNX16P57768 344 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 ECT2LQ008S8 904 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 SLC12A1Q13621 1099 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 DPCR1Q3MIW9 517 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 TTC31Q49AM3 519 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-203ENST00000472892 MIIPQ5JXC2 388 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 IL27RAQ6UWB1 636 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 OLFML1Q6UWY5 402 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 C11orf57Q6ZUT1 292 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-203ENST00000472892 USP30Q70CQ3 517 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 SLC47A2Q86VL8 602 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 CHSY1Q86X52 802 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 PASD1Q8IV76 773 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 FAM71AQ8IYT1 594 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 APCDD1Q8J025 514 aa15.8■□□□□ 0.12
VTI1A-203ENST00000472892 BIRC7Q96CA5 298 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms