RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 TARSP26639 723 aaKnown RBP20.61■□□□□ 0.89
SF1-213ENST00000472725 NOP2P46087 812 aaKnown RBP20.61■□□□□ 0.89
SF1-213ENST00000472725 SLC6A11P48066 632 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 SGSHP51688 502 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 CCZ1BP86790 482 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 CCZ1P86791 482 aaPredicted RBP20.61■□□□□ 0.89
SF1-213ENST00000472725 SLC12A1Q13621 1099 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 IFI16Q16666 785 aaKnown RBP20.61■□□□□ 0.89
SF1-213ENST00000472725 MANEALQ5VSG8 457 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 CWF19L1Q69YN2 538 aaKnown RBP20.61■□□□□ 0.89
SF1-213ENST00000472725 ASTLQ6HA08 431 aaPredicted RBP20.61■□□□□ 0.89
SF1-213ENST00000472725 FSTL4Q6MZW2 842 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 MFN1Q8IWA4 741 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 TERB1Q8NA31 727 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 FLCNQ8NFG4 579 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 WFIKKN2Q8TEU8 576 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 BHMTQ93088 406 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 EPAS1Q99814 870 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 TSGA10Q9BZW7 698 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 ZYG11BQ9C0D3 744 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 NDRG2Q9UN36 371 aaKnown RBP20.61■□□□□ 0.89
SF1-213ENST00000472725 AP4E1Q9UPM8 1137 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 ADGRG1Q9Y653 693 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 TIMM44O43615 452 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 PTMAP06454 111 aaKnown RBP20.6■□□□□ 0.89
SF1-213ENST00000472725 SLC25A11Q02978 314 aaKnown RBP20.6■□□□□ 0.89
SF1-213ENST00000472725 CCDC173Q0VFZ6 552 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 SEMA3BQ13214 749 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 CDH18Q13634 790 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 DMC1Q14565 340 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 MESDQ14696 234 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 EIF4HQ15056 248 aaKnown RBP20.6■□□□□ 0.89
SF1-213ENST00000472725 TMEM31Q5JXX7 168 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 ZNF662Q6ZS27 426 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 POLNQ7Z5Q5 900 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 KIAA0907Q7Z7F0 614 aaPredicted RBP20.6■□□□□ 0.89
SF1-213ENST00000472725 C14orf80Q86SX3 495 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 CCDC105Q8IYK2 499 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 CCAR2Q8N163 923 aaKnown RBP20.6■□□□□ 0.89
SF1-213ENST00000472725 CFAP52Q8N1V2 620 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 UBE2Q2Q8WVN8 375 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 IGSF8Q969P0 613 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 P2RY11Q96G91 374 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 SNRNP25Q9BV90 132 aaKnown RBP20.6■□□□□ 0.89
SF1-213ENST00000472725 TMPRSS4Q9NRS4 437 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 KIAA1522Q9P206 1035 aaPredicted RBP20.6■□□□□ 0.89
SF1-213ENST00000472725 STIM2Q9P246 746 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 PCSK1NQ9UHG2 260 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 STARD13Q9Y3M8 1113 aa20.6■□□□□ 0.89
SF1-213ENST00000472725 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.59■□□□□ 0.89
SF1-213ENST00000472725 H0Y626 953 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 KRT7P08729 469 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 CCDC175P0C221 793 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 HOXC13P31276 330 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 HCAR3P49019 387 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 ZNF177Q13360 481 aaPredicted RBP20.59■□□□□ 0.89
SF1-213ENST00000472725 FZD5Q13467 585 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 DPYSL2Q16555 572 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 HSF5Q4G112 596 aaPredicted RBP20.59■□□□□ 0.89
SF1-213ENST00000472725 LRRC38Q5VT99 294 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 C11orf63Q6NUN7 778 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 CYP4V2Q6ZWL3 525 aaPredicted RBP20.59■□□□□ 0.89
SF1-213ENST00000472725 ANKS1BQ7Z6G8 1248 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 SETD3Q86TU7 594 aaPredicted RBP20.59■□□□□ 0.89
SF1-213ENST00000472725 TBC1D31Q96DN5 1066 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 MYEOVQ96EZ4 313 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 PEBP4Q96S96 227 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 FOXQ1Q9C009 403 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 LMAN1LQ9HAT1 526 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 FBRSL1Q9HCM7 1045 aaKnown RBP20.59■□□□□ 0.89
SF1-213ENST00000472725 C11orf16Q9NQ32 467 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 TBC1D30Q9Y2I9 924 aa20.59■□□□□ 0.89
SF1-213ENST00000472725 TBC1D3BA6NDS4 549 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 RCCD1A6NED2 376 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 NPC1O15118 1278 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 SRGAP2O75044 1071 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 LRIG2O94898 1065 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 PDGFBP01127 241 aaPredicted RBP20.58■□□□□ 0.89
SF1-213ENST00000472725 RHOQP17081 205 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 NUBP1P53384 320 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 ARTNQ5T4W7 220 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 ZNF783Q6ZMS7 281 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 MAMSTRQ6ZN01 415 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 AHI1Q8N157 1196 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 CARNMT1Q8N4J0 409 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 RNF10Q8N5U6 811 aaKnown RBP20.58■□□□□ 0.89
SF1-213ENST00000472725 DESI2Q9BSY9 194 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 LACRTQ9GZZ8 138 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 DHX35Q9H5Z1 703 aaKnown RBP20.58■□□□□ 0.89
SF1-213ENST00000472725 CATSPERBQ9H7T0 1116 aa20.58■□□□□ 0.89
SF1-213ENST00000472725 MTF2Q9Y483 593 aaPredicted RBP20.58■□□□□ 0.89
SF1-213ENST00000472725 K7EQS6 105 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 FGF10O15520 208 aaPredicted RBP20.57■□□□□ 0.88
SF1-213ENST00000472725 KRT86O43790 486 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 ATG13O75143 517 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 MOCS3O95396 460 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 EGFP01133 1207 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 RARAP10276 462 aa20.57■□□□□ 0.88
SF1-213ENST00000472725 PABPC1P11940 636 aaKnown RBP20.57■□□□□ 0.88
SF1-213ENST00000472725 IL1R2P27930 398 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms