RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 CLDN3O15551 220 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 EDIL3O43854 480 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 DNAJC8O75937 253 aaPredicted RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 OAZ2O95190 189 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 CLTAP09496 248 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 CEBPBP17676 345 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 TYMPP19971 482 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 TKTP29401 623 aaKnown RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 GDI1P31150 447 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 MCM7P33993 719 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 CCT6AP40227 531 aaKnown RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 PRPHP41219 470 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 MATR3P43243 847 aaKnown RBP eCLIP3.78□□□□□ -1.84e-9■■■■■ 32.8
XRN1-209ENST00000472625 TUFMP49411 452 aaKnown RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 MCM2P49736 904 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 KPNA1P52294 538 aaPredicted RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 ATXN1P54253 815 aaKnown RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 JAM2P57087 298 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 IRX6P78412 446 aaPredicted RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 POU5F1Q01860 360 aaKnown RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 GRSF1Q12849 480 aaKnown RBP eCLIP3.78□□□□□ -1.8
XRN1-209ENST00000472625 MYBPC2Q14324 1141 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 PDIA5Q14554 519 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ELF2Q15723 593 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 NAB2Q15742 525 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 TAF12Q16514 161 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ST3GAL2Q16842 350 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 FBXO43Q4G163 708 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 AASDHQ4L235 1098 aaPredicted RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 CTXN3Q4LDR2 81 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 XKR4Q5GH76 650 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 GLRA4Q5JXX5 417 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 PHF19Q5T6S3 580 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 CD276Q5ZPR3 534 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 MAEAQ7L5Y9 396 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 DPH6Q7L8W6 267 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 OVCH1Q7RTY7 1134 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 CACNA2D4Q7Z3S7 1137 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 BRAPQ7Z569 592 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 METTL23Q86XA0 190 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 CATSPER3Q86XQ3 398 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 MAML2Q8IZL2 1156 aaPredicted RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 CAMKK1Q8N5S9 505 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 FAM184AQ8NB25 1140 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ITFG1Q8TB96 612 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 PIGOQ8TEQ8 1089 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ING5Q8WYH8 240 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 MCRS1Q96EZ8 462 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 BICD1Q96G01 975 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 CDK5RAP3Q96JB5 506 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 C8orf76Q96K31 380 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ZNF560Q96MR9 790 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 AIFM3Q96NN9 605 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 PAAF1Q9BRP4 392 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 SSBP3Q9BWW4 388 aaPredicted RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 BHMT2Q9H2M3 363 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ZNF334Q9HCZ1 680 aaPredicted RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 KMT5AQ9NQR1 393 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 SEMA4GQ9NTN9 838 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 MIOSQ9NXC5 875 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 EHD2Q9NZN4 543 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ARHGAP28Q9P2N2 729 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ANKFY1Q9P2R3 1169 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 DNMT3BQ9UBC3 853 aaKnown RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 LRWD1Q9UFC0 647 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 FBXL5Q9UKA1 691 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ANGPTL2Q9UKU9 493 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 UBQLN1Q9UMX0 589 aaKnown RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 NDRG2Q9UN36 371 aaKnown RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 SRPK3Q9UPE1 567 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 DERAQ9Y315 318 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 CFAP47Q6ZTR5 3102 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 WDFY3Q8IZQ1 3526 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 EVPLQ92817 2033 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 MYBPHLA2RUH7 354 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 TMEM8BA6NDV4 472 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 HEPACAM2A8MVW5 462 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 BTBD18B2RXH4 712 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 FAM47E-STBD1D6RA91 191 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 M0QZQ0 153 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 AQP7O14520 342 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 PPP1R12AO14974 1030 aaPredicted RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 HNRNPDLO14979 420 aaKnown RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 RPP40O75818 363 aaKnown RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 RHOBTB1O94844 696 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 KLHL18O94889 574 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 MPIG6BO95866 241 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 BMP15O95972 392 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 C4BPAP04003 597 aaKnown RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 CCDC192P0DO97 292 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 MYBP10242 640 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 MYL4P12829 197 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 TDGF1P13385 188 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 DRD1P21728 446 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 PROZP22891 400 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 FCARP24071 287 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 LRPAP1P30533 357 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 RDXP35241 583 aaKnown RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 AVPR1AP37288 418 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms