RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ATMINO43313 823 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 CLDN11O75508 207 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 ALDH1A2O94788 518 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 KLF8O95600 359 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 HNRNPLP14866 589 aaKnown RBP eCLIP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 POLR2EP19388 210 aaKnown RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 PSMA2P25787 234 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 NTSR1P30989 418 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 ADRA1BP35368 520 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 ATXN1P54253 815 aaKnown RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 HDAC4P56524 1084 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 GFPT1Q06210 699 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 ZNF177Q13360 481 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 CRY1Q16526 586 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 GEN1Q17RS7 908 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 EFHC2Q5JST6 749 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 SCYL2Q6P3W7 929 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 CHST9Q7L1S5 443 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 SLFN11Q7Z7L1 901 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 ALLCQ8N6M5 410 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 TXNDC5Q8NBS9 432 aaKnown RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 ATRIPQ8WXE1 791 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 CTNNBL1Q8WYA6 563 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 NTAN1Q96AB6 310 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 P2RY11Q96G91 374 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 THAP2Q9H0W7 228 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 RETREG1Q9H6L5 497 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 POLMQ9NP87 494 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-211ENST00000472490 ZSCAN32Q9NX65 697 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 LCMT1Q9UIC8 334 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 CLEC4EQ9ULY5 219 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 PCDHGA2Q9Y5H1 932 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 TRIOO75962 3097 aa14.66□□□□□ -0.06
BRCA1-211ENST00000472490 GOLGA6L6A8MZA4 724 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 CCP110O43303 1012 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 APBB3O95704 486 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 H2AFZP0C0S5 128 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 CDH4P55283 916 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 C5orf22Q49AR2 442 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 SH3PXD2AQ5TCZ1 1133 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 EMC10Q5UCC4 262 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 PKN3Q6P5Z2 889 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 H2AFVQ71UI9 128 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 KIAA0907Q7Z7F0 614 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-211ENST00000472490 SFTPA1Q8IWL2 248 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 CCAR2Q8N163 923 aaKnown RBP14.65□□□□□ -0.06
BRCA1-211ENST00000472490 CCDC33Q8N5R6 958 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 TSTD1Q8NFU3 115 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 OSBPL2Q9H1P3 480 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 PPARGC1AQ9UBK2 798 aaKnown RBP14.65□□□□□ -0.06
BRCA1-211ENST00000472490 OR12D3Q9UGF7 316 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 KMT2EQ8IZD2 1858 aa14.65□□□□□ -0.06
BRCA1-211ENST00000472490 DRGXA6NNA5 263 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 EIF3CLB5ME19 914 aaKnown RBP14.64□□□□□ -0.07
BRCA1-211ENST00000472490 E9PAM4 449 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 K7ESF4 209 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 SRGAP2O75044 1071 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 ASLP04424 464 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 CYP1A2P05177 515 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 CDC25BP30305 580 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 CNR2P34972 360 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 GALCP54803 685 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 NRG1Q02297 640 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-211ENST00000472490 SCAPQ12770 1279 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 PIGHQ14442 188 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-211ENST00000472490 STARD3Q14849 445 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 ASTE1Q2TB18 679 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-211ENST00000472490 EGFLAMQ63HQ2 1017 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 MBLAC2Q68D91 279 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 TSSK4Q6SA08 328 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 LONP2Q86WA8 852 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 DNAAF5Q86Y56 855 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 CCDC170Q8IYT3 715 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 TC2NQ8N9U0 490 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 IGSF8Q969P0 613 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 MYEOVQ96EZ4 313 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 PANX2Q96RD6 677 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 EIF3CQ99613 913 aaKnown RBP14.64□□□□□ -0.07
BRCA1-211ENST00000472490 CHP1Q99653 195 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 ZYG11BQ9C0D3 744 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 SEMA4AQ9H3S1 761 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 LUC7LQ9NQ29 371 aaKnown RBP14.64□□□□□ -0.07
BRCA1-211ENST00000472490 ANLNQ9NQW6 1124 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 DONSONQ9NYP3 566 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 IMPACTQ9P2X3 320 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 UVRAGQ9P2Y5 699 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 THAP10Q9P2Z0 257 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-211ENST00000472490 IP6K2Q9UHH9 426 aa14.64□□□□□ -0.07
BRCA1-211ENST00000472490 IGLV3-10A0A075B6K4 115 aa14.63□□□□□ -0.07
BRCA1-211ENST00000472490 SGK1O00141 431 aa14.63□□□□□ -0.07
BRCA1-211ENST00000472490 MYO1FO00160 1098 aa14.63□□□□□ -0.07
BRCA1-211ENST00000472490 PRPSAP2O60256 369 aa14.63□□□□□ -0.07
BRCA1-211ENST00000472490 SYNCRIPO60506 623 aaKnown RBP14.63□□□□□ -0.07
BRCA1-211ENST00000472490 DLDP09622 509 aaKnown RBP14.63□□□□□ -0.07
BRCA1-211ENST00000472490 HOXB2P14652 356 aa14.63□□□□□ -0.07
BRCA1-211ENST00000472490 CD70P32970 193 aa14.63□□□□□ -0.07
BRCA1-211ENST00000472490 GGCXP38435 758 aa14.63□□□□□ -0.07
BRCA1-211ENST00000472490 NNMTP40261 264 aa14.63□□□□□ -0.07
BRCA1-211ENST00000472490 ST8SIA6P61647 398 aa14.63□□□□□ -0.07
BRCA1-211ENST00000472490 OGDHQ02218 1023 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms