RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TRIM49CP0CI26 452 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 CD27P26842 260 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 HNF1BP35680 557 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 CSNK1EP49674 416 aaKnown RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 MXI1P50539 228 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 TKTL1P51854 596 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 C21orf59P57076 290 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 RAB15P59190 212 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 ST8SIA6P61647 398 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 YWHAEP62258 255 aaKnown RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 TRIP4Q15650 581 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 KIF19Q2TAC6 998 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 SOWAHCQ53LP3 525 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 RAB41Q5JT25 222 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 ZNF776Q68DI1 518 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 ARHGAP17Q68EM7 881 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 CHST9Q7L1S5 443 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 PIGZQ86VD9 579 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 CCDC117Q8IWD4 279 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 GRAMD1CQ8IYS0 662 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 SIX6OS1Q8N1H7 587 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 ANKRD52Q8NB46 1076 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 C1orf216Q8TAB5 229 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 HNRNPLLQ8WVV9 542 aaKnown RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 NXPE2Q96DL1 559 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 CCDC34Q96HJ3 373 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 TMEM176AQ96HP8 235 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 ARID3AQ99856 593 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 ACE2Q9BYF1 805 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 MMRN2Q9H8L6 949 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 APOBEC3GQ9HC16 384 aaKnown RBP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 TM9SF3Q9HD45 589 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 CISHQ9NSE2 258 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 SUN2Q9UH99 717 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 SERTAD1Q9UHV2 236 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.51□□□□□ -0.89
CPSF4-211ENST00000471455 ANKRD6Q9Y2G4 727 aa9.51□□□□□ -0.89
CPSF4-211ENST00000471455 DMXL2Q8TDJ6 3036 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 XPO1O14980 1071 aaKnown RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 IRAK2O43187 625 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 PAPSS1O43252 624 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 FSBPO95073 299 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 F13A1P00488 732 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 DLDP09622 509 aaKnown RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 ZSCAN22P10073 491 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 PABPC1P11940 636 aaKnown RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 HLA-EP13747 358 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 POLR2EP19388 210 aaKnown RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 HOXD9P28356 352 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 SLC11A2P49281 568 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 BNC1Q01954 994 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 SMAD1Q15797 465 aaKnown RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 ZNF394Q53GI3 561 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 C1orf220Q5T0J3 134 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 MPP7Q5T2T1 576 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 C6orf118Q5T5N4 469 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 ADGRF1Q5T601 910 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 NUGGCQ68CJ6 796 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 PM20D1Q6GTS8 502 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 USP30Q70CQ3 517 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 TMPRSS12Q86WS5 348 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 FMNL3Q8IVF7 1028 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 RBBP8NLQ8NC74 664 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 FBXL13Q8NEE6 735 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 GANCQ8TET4 914 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 SORCS1Q8WY21 1168 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 TMA16Q96EY4 203 aaKnown RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 LRIG1Q96JA1 1093 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 DDX50Q9BQ39 737 aaKnown RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 TMEM245Q9H330 911 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 C6orf106Q9H6K1 298 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-211ENST00000471455 GDPD2Q9HCC8 539 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 ABCB8Q9NUT2 735 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 GGA2Q9UJY4 613 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 STOML2Q9UJZ1 356 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 PCDHGA1Q9Y5H4 931 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 SNX11Q9Y5W9 270 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 ITPR1Q14643 2758 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 PTPRBP23467 1997 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 IGSF10Q6WRI0 2623 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 KNTC1P50748 2209 aa9.5□□□□□ -0.89
CPSF4-211ENST00000471455 PLXNB3Q9ULL4 1909 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 A0A087WV48 116 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 TRABD2BA6NFA1 517 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 LRRC72A6NJI9 287 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 TSPAN3O60637 253 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 ASLP04424 464 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 C1SP09871 688 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 SETSIPP0DME0 302 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 EPB41P11171 864 aaKnown RBP9.49□□□□□ -0.89
CPSF4-211ENST00000471455 HLA-FP30511 346 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 ACSL1P33121 698 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 CTSKP43235 329 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 ABCG1P45844 678 aa9.49□□□□□ -0.89
CPSF4-211ENST00000471455 RPS14P62263 151 aaKnown RBP9.49□□□□□ -0.89
CPSF4-211ENST00000471455 RACK1P63244 317 aaKnown RBP9.49□□□□□ -0.89
CPSF4-211ENST00000471455 PPP3CAQ08209 521 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms