RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MANEAQ5SRI9 462 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 MSANTD2Q6P1R3 559 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 FAM47BQ8NA70 645 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 IPO11Q9UI26 975 aaKnown RBP6.31□□□□□ -1.4
CCDC39-202ENST00000471307 DNMT1P26358 1616 aaKnown RBP6.31□□□□□ -1.4
CCDC39-202ENST00000471307 DAPK1P53355 1430 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 ARHGEF5Q12774 1597 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 CFAP74Q9C0B2 1584 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 ROCK1Q13464 1354 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 KIF13AQ9H1H9 1805 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 TEX14Q8IWB6 1497 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 PNMA6EA0A0J9YXQ4 647 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 B4DGG1 531 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 H3BNX3 289 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 J3KTA2 159 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 ANXA2RQ3ZCQ2 193 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 ZNF474Q6S9Z5 364 aaPredicted RBP6.3□□□□□ -1.4
CCDC39-202ENST00000471307 C9orf47Q6ZRZ4 202 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 ADGRF4Q8IZF3 695 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 CCDC138Q96M89 665 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 NLRP4Q96MN2 994 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 ELOVL1Q9BW60 279 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 FAM234AQ9H0X4 552 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 ZBTB40Q9NUA8 1239 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 DECR2Q9NUI1 292 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 SQORQ9Y6N5 450 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 PTPRKQ15262 1439 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 SCAPERQ9BY12 1400 aa6.3□□□□□ -1.4
CCDC39-202ENST00000471307 ADGRL1O94910 1474 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 CCDC141Q6ZP82 1450 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 ZNF814B7Z6K7 855 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 M0QZQ0 153 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 CRYABP02511 175 aaKnown RBP6.29□□□□□ -1.4
CCDC39-202ENST00000471307 KRT18P05783 430 aaKnown RBP6.29□□□□□ -1.4
CCDC39-202ENST00000471307 MYL3P08590 195 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 ITGA5P08648 1049 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 RAB30Q15771 203 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 LIPMQ5VYY2 423 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 LVRNQ6Q4G3 990 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 DHRS13Q6UX07 377 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 KSR2Q6VAB6 950 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 RHPN2Q8IUC4 686 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 AFAP1Q8N556 730 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 ADPRHL1Q8NDY3 354 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 SRFBP1Q8NEF9 429 aaKnown RBP6.29□□□□□ -1.4
CCDC39-202ENST00000471307 NPIPB3Q92617 1050 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 HTATIP2Q9BUP3 242 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 KRTAP1-5Q9BYS1 174 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 SETD5Q9C0A6 1442 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 CERS4Q9HA82 394 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 FSCN3Q9NQT6 498 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 NFU1Q9UMS0 254 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 PCDHA12Q9UN75 941 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 ABCC1P33527 1531 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 SYCP2Q9BX26 1530 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 ARHGEF12Q9NZN5 1544 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 ANKRD30AQ9BXX3 1397 aa6.29□□□□□ -1.4
CCDC39-202ENST00000471307 SHANK2Q9UPX8 1470 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 SPAG9O60271 1321 aaKnown RBP6.28□□□□□ -1.4
CCDC39-202ENST00000471307 HFM1A2PYH4 1435 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 RTEL1-TNFRSF6BF6WH68 1400 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 NCOA1Q15788 1441 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 KIR2DS5A0A0G2JLQ3 304 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 KIR2DS3K7RE56 304 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 FGF2P09038 288 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 TBXAS1P24557 533 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-202ENST00000471307 HSPA7P48741 367 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 PICALMQ13492 652 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 DLGAP5Q15398 846 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 MPEG1Q2M385 716 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 MIDNQ504T8 468 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 DAB2IPQ5VWQ8 1189 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 ISM2Q6H9L7 571 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 WDR93Q6P2C0 686 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 C16orf89Q6UX73 402 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 CLMNQ96JQ2 1002 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 PIMREGQ9BSJ6 248 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 STK33Q9BYT3 514 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 PRDM16Q9HAZ2 1276 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 RRP7BPQ9NSQ0 103 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 SLC52A1Q9NWF4 448 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 MSRB1Q9NZV6 116 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 B3GNT3Q9Y2A9 372 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 TSPOAP1O95153 1857 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 ADGRL2O95490 1459 aa6.28□□□□□ -1.4
CCDC39-202ENST00000471307 C9orf84Q5VXU9 1444 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 TRAPPC8Q9Y2L5 1435 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 FAM90A8PA6NJQ4 464 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 UGDHO60701 494 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 PLA2G6O60733 806 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 TAF5LO75529 589 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 MYL1P05976 194 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 RFPL3SP0C7P2 107 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 FAM90A13PP0C7W8 464 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 FAM90A24PP0C7X0 464 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 TNFRSF1BP20333 461 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 ARL14EPQ8N8R7 260 aaPredicted RBP6.27□□□□□ -1.41
CCDC39-202ENST00000471307 OR52N4Q8NGI2 321 aa6.27□□□□□ -1.41
CCDC39-202ENST00000471307 MARK4Q96L34 752 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms