RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 C2orf16Q68DN1 1984 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 IGLV3-10A0A075B6K4 115 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 DNALI1O14645 258 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 CCL16O15467 120 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 CLASP2O75122 1294 aaKnown RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 PPFIA2O75334 1257 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 STC2O76061 302 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 TMEM63AO94886 807 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 METTL18O95568 372 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 OLFM2O95897 454 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 GLUD1P00367 558 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 ITIH2P19823 946 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 ATP5C1P36542 298 aaKnown RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 TNNT3P45378 269 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 TUBP50607 506 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 EPHB3P54753 998 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 CYP4F8P98187 520 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 NRG1Q02297 640 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 CREMQ03060 361 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 LMNB2Q03252 620 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 WASHC5Q12768 1159 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 XRCC4Q13426 336 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 HECTD3Q5T447 861 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 SYCP2LQ5T4T6 812 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 IZUMO3Q5VZ72 239 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 RAP1GAP2Q684P5 730 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 RWDD4Q6NW29 188 aaKnown RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 RFWD3Q6PCD5 774 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 KLHDC10Q6PID8 442 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 CIR1Q86X95 450 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 IQCKQ8N0W5 287 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 MREGQ8N565 214 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 RSAD2Q8WXG1 361 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 WDR83Q9BRX9 315 aaKnown RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 KLF16Q9BXK1 252 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 CEP41Q9BYV8 373 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 MTIF3Q9H2K0 278 aaKnown RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 OLA1Q9NTK5 396 aaKnown RBP8.58□□□□□ -1.04
GTF3A-206ENST00000470606 STK39Q9UEW8 545 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 DNMT3LQ9UJW3 386 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 MAFFQ9ULX9 164 aa8.58□□□□□ -1.04
GTF3A-206ENST00000470606 HELZP42694 1942 aaKnown RBP8.57□□□□□ -1.04
GTF3A-206ENST00000470606 H3BNC9 293 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 KCNK1O00180 336 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 MOSPD3O75425 235 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 ZFXP17010 805 aaPredicted RBP8.57□□□□□ -1.04
GTF3A-206ENST00000470606 STIP1P31948 543 aaKnown RBP8.57□□□□□ -1.04
GTF3A-206ENST00000470606 HSD17B3P37058 310 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 SGSHP51688 502 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 UBE3AQ05086 875 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 DHX9Q08211 1270 aaKnown RBP8.57□□□□□ -1.04
GTF3A-206ENST00000470606 MTM1Q13496 603 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 VEPH1Q14D04 833 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 MAP9Q49MG5 647 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 FAXCQ5TGI0 409 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 AFMIDQ63HM1 303 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 HDXQ7Z353 690 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 AGGF1Q8N302 714 aaeCLIP8.57□□□□□ -1.047e-8■■□□□ 11.5
GTF3A-206ENST00000470606 ARL14EPQ8N8R7 260 aaPredicted RBP8.57□□□□□ -1.04
GTF3A-206ENST00000470606 PDZD8Q8NEN9 1154 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 OR52K2Q8NGK3 314 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 RIN3Q8TB24 985 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 MICAL1Q8TDZ2 1067 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.57□□□□□ -1.04
GTF3A-206ENST00000470606 PRCCQ92733 491 aaPredicted RBP8.57□□□□□ -1.04
GTF3A-206ENST00000470606 TCEAL4Q96EI5 215 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 BTN2A3PQ96KV6 586 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 TGS1Q96RS0 853 aaKnown RBP8.57□□□□□ -1.04
GTF3A-206ENST00000470606 EPAS1Q99814 870 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 GORASP1Q9BQQ3 440 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 SEMA4AQ9H3S1 761 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 SMPD4Q9NXE4 827 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 TRPM5Q9NZQ8 1165 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 SSX2IPQ9Y2D8 614 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 PCDHA11Q9Y5I1 949 aa8.57□□□□□ -1.04
GTF3A-206ENST00000470606 A0A1W2PRU2 124 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 F5H423 210 aaPredicted RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 H0YGN5 161 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 H3BQF6 201 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 TRDMT1O14717 391 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 BANF1O75531 89 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 RB1P06400 928 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 SLC2A3P11169 496 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 GABRR2P28476 465 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 GARSP41250 739 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 NUMBP49757 651 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 GALNT2Q10471 571 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 GPM6BQ13491 265 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 FASTKD3Q14CZ7 662 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 SLC5A9Q2M3M2 681 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 ZNF697Q5TEC3 545 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 TFAP2DQ7Z6R9 452 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 RBM23Q86U06 439 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 DENND1CQ8IV53 801 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 NAT8LQ8N9F0 302 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 VN1R2Q8NFZ6 395 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 OR2W6PQ8NHA6 318 aa8.56□□□□□ -1.04
GTF3A-206ENST00000470606 TFB1MQ8WVM0 346 aaKnown RBP8.56□□□□□ -1.04
GTF3A-206ENST00000470606 HTR3CQ8WXA8 447 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms