RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 LHX1P48742 406 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 RPL34P49207 117 aaKnown RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 KCNJ2P63252 427 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 TMPRSS15P98073 1019 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 GAD2Q05329 585 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 DEUP1Q05D60 604 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 CDK18Q07002 472 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 ADIGQ0VDE8 80 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 WLSQ5T9L3 541 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 C6orf163Q5TEZ5 329 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 ITPRIPL1Q6GPH6 555 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 CGB2Q6NT52 195 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 TRNP1Q6NT89 227 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 ZNF449Q6P9G9 518 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 ALKAL1Q6UXT8 129 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 KYAT3Q6YP21 454 aaKnown RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 DENND5BQ6ZUT9 1274 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 CYS1Q717R9 158 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 ASRGL1Q7L266 308 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 CRLF3Q8IUI8 442 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMC4-212ENST00000470240 CFAP61Q8NHU2 1237 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 CCDC110Q8TBZ0 833 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 MZB1Q8WU39 189 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 DNAJB3Q8WWF6 145 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 KCTD13Q8WZ19 329 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 MCUR1Q96AQ8 359 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 C18orf25Q96B23 403 aaPredicted RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 TBC1D31Q96DN5 1066 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 ZMAT2Q96NC0 199 aaKnown RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 FAM111AQ96PZ2 611 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 SRPK1Q96SB4 655 aaKnown RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 SLC9A7Q96T83 725 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 HNRNPABQ99729 332 aaKnown RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 DUSP16Q9BY84 665 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 WWP1Q9H0M0 922 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 RUBCNLQ9H714 662 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 SLCO1B3Q9NPD5 702 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 ZNF358Q9NW07 568 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 SLC17A7Q9P2U7 560 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 MID2Q9UJV3 735 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 FZD10Q9ULW2 581 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 SCN1AP35498 2009 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 A0A0G2JND7 137 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 FAM159BA6NKW6 160 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 ERI2A8K979 691 aaKnown RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 EEF2KO00418 725 aaKnown RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 CYB561D2O14569 222 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 PSMD3O43242 534 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 GLRA3O75311 464 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 DHRS4L1P0CG22 281 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 SRGAP2BP0DMP2 458 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 PAX3P23760 479 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 AKAP5P24588 427 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 TARSP26639 723 aaKnown RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 MSX1P28360 303 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 PTPN4P29074 926 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 PCSK1P29120 753 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 LRPAP1P30533 357 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 HOXA11P31270 313 aaPredicted RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 CCNFP41002 786 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 MRPS5P82675 430 aaKnown RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 COG7P83436 770 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 AP1B1Q10567 949 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 PRPSAP1Q14558 356 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 E2F5Q15329 346 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 TAF1BQ53T94 588 aaPredicted RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 DCAF6Q58WW2 860 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 ANKRD20A2Q5SQ80 823 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 WASHC2DQ5SRD0 308 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 FAXCQ5TGI0 409 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 ANKRD20A1Q5TYW2 823 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 NCBP2-AS2Q69YL0 99 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 LRRC8BQ6P9F7 803 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 KCNT2Q6UVM3 1135 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 DSTYKQ6XUX3 929 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 UNC5AQ6ZN44 842 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 MARK2Q7KZI7 788 aaKnown RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 RASSF3Q86WH2 238 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 METTL23Q86XA0 190 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 NUDCD3Q8IVD9 361 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 DEFB106AQ8N104 65 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 KIF2BQ8N4N8 673 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 SVOPQ8N4V2 548 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 CCNYQ8ND76 341 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 PPP4R1Q8TF05 950 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 SH3TC2Q8TF17 1288 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 RNF139Q8WU17 664 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 SOCS4Q8WXH5 440 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 BRI3BPQ8WY22 251 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 WNT8BQ93098 351 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 E2F7Q96AV8 911 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 THOC1Q96FV9 657 aaKnown RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 PIWIL1Q96J94 861 aaKnown RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 C7orf26Q96N11 449 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 TSNARE1Q96NA8 513 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 PPP1R2P1Q96PQ5 205 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 KLF6Q99612 283 aaPredicted RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 TMEM120AQ9BXJ8 343 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 DPEP3Q9H4B8 488 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms