RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ANKRD17O75179 2603 aaKnown RBP12.5□□□□□ -0.41
LSM2-209ENST00000470083 MYH10P35580 1976 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 FFAR2O15552 330 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 EFSO43281 561 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 STX6O43752 255 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 P4HA1P13674 534 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 GOT1P17174 413 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 SLC8A1P32418 973 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 HOXD13P35453 343 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 NUDT1P36639 197 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 MLLT3P42568 568 aaPredicted RBP12.49□□□□□ -0.41
LSM2-209ENST00000470083 INHBCP55103 352 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 TLE1Q04724 770 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 NCOA4Q13772 614 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 TRIP4Q15650 581 aaPredicted RBP12.49□□□□□ -0.41
LSM2-209ENST00000470083 C9orf64Q5T6V5 341 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 SND1Q7KZF4 910 aaKnown RBP eCLIP12.49□□□□□ -0.41
LSM2-209ENST00000470083 RSRC2Q7L4I2 434 aaKnown RBP12.49□□□□□ -0.41
LSM2-209ENST00000470083 TMC6Q7Z403 805 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 CLEC14AQ86T13 490 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 AADATQ8N5Z0 425 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 TMA16Q96EY4 203 aaKnown RBP12.49□□□□□ -0.41
LSM2-209ENST00000470083 PRR11Q96HE9 360 aaPredicted RBP12.49□□□□□ -0.41
LSM2-209ENST00000470083 ARHGAP9Q9BRR9 750 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 USP29Q9HBJ7 922 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 UCKL1Q9NWZ5 548 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 ARHGAP20Q9P2F6 1191 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 STOML2Q9UJZ1 356 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 DMTF1Q9Y222 760 aa12.49□□□□□ -0.41
LSM2-209ENST00000470083 CLEC18AA5D8T8 446 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 TRIM21P19474 475 aaKnown RBP12.48□□□□□ -0.41
LSM2-209ENST00000470083 CD70P32970 193 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 HARS2P49590 506 aaKnown RBP12.48□□□□□ -0.41
LSM2-209ENST00000470083 ST8SIA6P61647 398 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 BIRC3Q13489 604 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 C4orf17Q53FE4 359 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 RRAGBQ5VZM2 374 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 CLEC18BQ6UXF7 455 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 PRPF39Q86UA1 669 aaKnown RBP12.48□□□□□ -0.41
LSM2-209ENST00000470083 ARHGAP18Q8N392 663 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 ARL14Q8N4G2 192 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 KDM1BQ8NB78 822 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 CLEC18CQ8NCF0 446 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 WFDC5Q8TCV5 224 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 MAPK15Q8TD08 544 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 EXTL1Q92935 676 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 TTC17Q96AE7 1141 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 SGF29Q96ES7 293 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 ATXN7L3BQ96GX2 97 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 APOLD1Q96LR9 279 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 OSBPL2Q9H1P3 480 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 EVA1BQ9NVM1 165 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
LSM2-209ENST00000470083 TP53BP1Q12888 1972 aaPredicted RBP12.48□□□□□ -0.41
LSM2-209ENST00000470083 NBASA2RRP1 2371 aa12.48□□□□□ -0.41
LSM2-209ENST00000470083 UBE4BO95155 1302 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3DA0A087WVF3 549 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3IA0A087WXS9 549 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3EA0A087X179 549 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3KA0A087X1G2 549 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 LY6G6EA0A0G2JKS1 128 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3FA6NER0 549 aaPredicted RBP12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3LB9A6J9 549 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 EIF3DO15371 548 aaKnown RBP eCLIP12.47□□□□□ -0.41
LSM2-209ENST00000470083 ADH1BP00325 375 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 ASLP04424 464 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 FAM87AP0C7U9 286 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3HP0C7X1 549 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 GIMD1P0DJR0 217 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 ALPPL2P10696 532 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 C5AR1P21730 350 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 PSMD8P48556 350 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 DUSP3P51452 185 aaPredicted RBP12.47□□□□□ -0.41
LSM2-209ENST00000470083 CYP2J2P51589 502 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 STAT4Q14765 748 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 MPP7Q5T2T1 576 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 ADGRF1Q5T601 910 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3GQ6DHY5 549 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3CQ6IPX1 549 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 USP53Q70EK8 1073 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 CCDC65Q8IXS2 484 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TBC1D3Q8IZP1 549 aaPredicted RBP12.47□□□□□ -0.41
LSM2-209ENST00000470083 ZNF557Q8N988 423 aaPredicted RBP12.47□□□□□ -0.41
LSM2-209ENST00000470083 XXYLT1Q8NBI6 393 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
LSM2-209ENST00000470083 ELMO3Q96BJ8 720 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 CYFIP2Q96F07 1278 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 MRGPRX3Q96LB0 322 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 KDM4CQ9H3R0 1056 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 KLHL11Q9NVR0 708 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 NLGN3Q9NZ94 848 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 CYTH4Q9UIA0 394 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 ENTPD2Q9Y5L3 495 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 U3KQA8 63 aa12.47□□□□□ -0.41
LSM2-209ENST00000470083 TARSL2A2RTX5 802 aaKnown RBP12.46□□□□□ -0.41
LSM2-209ENST00000470083 H3BQV1 296 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 TGFB1I1O43294 461 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 GJB6O95452 261 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms