RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 NRG1Q02297 640 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-209ENST00000469852 GAD2Q05329 585 aa15.26■□□□□ 0.03
COL9A3-209ENST00000469852 C5orf22Q49AR2 442 aa15.26■□□□□ 0.03
COL9A3-209ENST00000469852 SLC44A4Q53GD3 710 aa15.26■□□□□ 0.03
COL9A3-209ENST00000469852 ETFBKMTQ8IXQ9 262 aa15.26■□□□□ 0.03
COL9A3-209ENST00000469852 RNF10Q8N5U6 811 aaKnown RBP15.26■□□□□ 0.03
COL9A3-209ENST00000469852 HJURPQ8NCD3 748 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-209ENST00000469852 TEKT4Q8WW24 435 aa15.26■□□□□ 0.03
COL9A3-209ENST00000469852 KRT35Q92764 455 aa15.26■□□□□ 0.03
COL9A3-209ENST00000469852 NCAPGQ9BPX3 1015 aa15.26■□□□□ 0.03
COL9A3-209ENST00000469852 DDX50Q9BQ39 737 aaKnown RBP15.26■□□□□ 0.03
COL9A3-209ENST00000469852 FBRSL1Q9HCM7 1045 aaKnown RBP15.26■□□□□ 0.03
COL9A3-209ENST00000469852 PACSIN2Q9UNF0 486 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-209ENST00000469852 ANTXRLA6NF34 631 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 CACNG3O60359 315 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 ALADP13716 330 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 CD72P21854 359 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 MTA1Q13330 715 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 MLF2Q15773 248 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-209ENST00000469852 DPYSL2Q16555 572 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 HADHQ16836 314 aaKnown RBP15.25■□□□□ 0.03
COL9A3-209ENST00000469852 BOLA3Q53S33 107 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 PPP6R3Q5H9R7 873 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-209ENST00000469852 TPRG1Q6ZUI0 275 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 NT5DC3Q86UY8 548 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 SFTPA1Q8IWL2 248 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 UBALD2Q8IYN6 164 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 CCAR2Q8N163 923 aaKnown RBP15.25■□□□□ 0.03
COL9A3-209ENST00000469852 PHTF2Q8N3S3 785 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 OR52K2Q8NGK3 314 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 KIAA1524Q8TCG1 905 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 PCDH18Q9HCL0 1135 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 NDFIP2Q9NV92 336 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 ZNF212Q9UDV6 495 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 F5P12259 2224 aa15.25■□□□□ 0.03
COL9A3-209ENST00000469852 ZSCAN12O43309 604 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 TULP3O75386 442 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 CYBBP04839 570 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 CISD3P0C7P0 127 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 GOT1P17174 413 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 HOXC13P31276 330 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 NUMBP49757 651 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 KDSRQ06136 332 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 NR1H3Q13133 447 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 MMRN1Q13201 1228 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 IFI16Q16666 785 aaKnown RBP15.24■□□□□ 0.03
COL9A3-209ENST00000469852 FSCBQ5H9T9 825 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 RABGAP1LQ5R372 815 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 RWDD4Q6NW29 188 aaKnown RBP15.24■□□□□ 0.03
COL9A3-209ENST00000469852 POLNQ7Z5Q5 900 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 ANKS1BQ7Z6G8 1248 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 TFAP2DQ7Z6R9 452 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 NLRP14Q86W24 1093 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 PSTKQ8IV42 348 aaKnown RBP15.24■□□□□ 0.03
COL9A3-209ENST00000469852 RHOT1Q8IXI2 618 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 CARNMT1Q8N4J0 409 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 FAM71BQ8TC56 605 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 RAPGEF5Q92565 580 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 TSC1Q92574 1164 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 TBC1D31Q96DN5 1066 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 CALR3Q96L12 384 aaKnown RBP15.24■□□□□ 0.03
COL9A3-209ENST00000469852 ARHGEF3Q9NR81 526 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.24■□□□□ 0.03
COL9A3-209ENST00000469852 CWC15Q9P013 229 aaKnown RBP15.24■□□□□ 0.03
COL9A3-209ENST00000469852 WNT16Q9UBV4 365 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 FBXO10Q9UK96 956 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 FBXL21Q9UKT6 434 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 TECTAO75443 2155 aa15.24■□□□□ 0.03
COL9A3-209ENST00000469852 A0A1B0GVM2 712 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 TCAF2A6NFQ2 919 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 C3orf70A6NLC5 250 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-209ENST00000469852 EEF2KO00418 725 aaKnown RBP15.23■□□□□ 0.03
COL9A3-209ENST00000469852 DCXO43602 365 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 LUC7L3O95232 432 aaKnown RBP15.23■□□□□ 0.03
COL9A3-209ENST00000469852 KRT1P04264 644 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 KRT7P08729 469 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 IL4RP24394 825 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 GALK1P51570 392 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 CDH6P55285 790 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 DPYSL3Q14195 570 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 PON2Q15165 354 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 MPP7Q5T2T1 576 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 LRRC38Q5VT99 294 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 CXorf57Q6NSI4 855 aaKnown RBP15.23■□□□□ 0.03
COL9A3-209ENST00000469852 LRRC31Q6UY01 552 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 RALGPS2Q86X27 583 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-209ENST00000469852 MFN1Q8IWA4 741 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 SIX5Q8N196 739 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 ALG3Q92685 438 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 EZH1Q92800 747 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-209ENST00000469852 LMLNQ96KR4 655 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 EPAS1Q99814 870 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 ZYG11BQ9C0D3 744 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 C8orf33Q9H7E9 229 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-209ENST00000469852 DNAJC17Q9NVM6 304 aaKnown RBP15.23■□□□□ 0.03
COL9A3-209ENST00000469852 PPARGC1AQ9UBK2 798 aaKnown RBP15.23■□□□□ 0.03
COL9A3-209ENST00000469852 MFHAS1Q9Y4C4 1052 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 MUC6Q6W4X9 2439 aa15.23■□□□□ 0.03
COL9A3-209ENST00000469852 DDX3YO15523 660 aaKnown RBP15.22■□□□□ 0.03
COL9A3-209ENST00000469852 PSTPIP1O43586 416 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms