RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ADAMTS10Q9H324 1103 aa9.24□□□□□ -0.93
SMARCE1-207ENST00000469334 POLR1BQ9H9Y6 1135 aa9.24□□□□□ -0.93
SMARCE1-207ENST00000469334 GDAP2Q9NXN4 497 aa9.24□□□□□ -0.93
SMARCE1-207ENST00000469334 NXF1Q9UBU9 619 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-207ENST00000469334 TLL2Q9Y6L7 1015 aa9.24□□□□□ -0.93
SMARCE1-207ENST00000469334 IVNS1ABPQ9Y6Y0 642 aa9.24□□□□□ -0.93
SMARCE1-207ENST00000469334 ITGB4P16144 1822 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 SYCE1LA8MT33 242 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 AIM2O14862 343 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ACOX3O15254 700 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 CHADO15335 359 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZBTB14O43829 449 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZC3H11AO75152 810 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 DEAF1O75398 565 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 MTRF1O75570 445 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 LYPLA1O75608 230 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZMPSTE24O75844 475 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 CRYZL1O95825 349 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 UGT2B4P06133 528 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 KRT3P12035 628 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 NCAM1P13591 858 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZNF182P17025 639 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 SERPINB1P30740 379 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 HSPA1LP34931 641 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 CDKN2BP42772 138 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 CDK8P49336 464 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ABCE1P61221 599 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 MRPS9P82933 396 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 MS4A2Q01362 244 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 RHDQ02161 417 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 GCNT1Q02742 428 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 C1QBPQ07021 282 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 MAMLD1Q13495 774 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 PEX6Q13608 980 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZFYVE27Q5T4F4 411 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 C4orf22Q6V702 233 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 SNX32Q86XE0 403 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 PHF13Q86YI8 300 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZC3H7AQ8IWR0 971 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 PARP8Q8N3A8 854 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 GOLM1Q8NBJ4 401 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 FEZF2Q8TBJ5 459 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 CAPSLQ8WWF8 208 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 CRYGNQ8WXF5 182 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ATL1Q8WXF7 558 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 LRRC39Q96DD0 335 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 SH3YL1Q96HL8 342 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 FAR2Q96K12 515 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 LENG8Q96PV6 779 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 EIF2AK1Q9BQI3 630 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 OR2B2Q9GZK3 357 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 RETREG1Q9H6L5 497 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 SP140LQ9H930 580 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 JMJD4Q9H9V9 463 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 WDR41Q9HAD4 459 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 AKIP1Q9NQ31 210 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 COPG2Q9UBF2 871 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 USTQ9Y2C2 406 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 PI4K2BG5E9Z4 385 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 PSMD11O00231 422 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZBTB5O15062 677 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 TLR3O15455 904 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 TEX28O15482 410 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 STAM2O75886 525 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ALX3O95076 343 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 GSRP00390 522 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 BMP2P12643 396 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 NELFEP18615 380 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 EEF1DP29692 281 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 IDUAP35475 653 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 STX1BP61266 288 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 GSTO1P78417 241 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 INSCQ1MX18 579 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 SLC27A3Q5K4L6 730 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ODR4Q5SWX8 454 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ATAD3BQ5T9A4 648 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ABRAXAS1Q6UWZ7 409 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZBTB49Q6ZSB9 765 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 GALNT13Q8IUC8 556 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 IGDCC3Q8IVU1 814 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 KIAA2013Q8IYS2 634 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 CNTD1Q8N815 330 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 SLC44A5Q8NCS7 719 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 PBXIP1Q96AQ6 731 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 VMP1Q96GC9 406 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 TCF12Q99081 682 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 C17orf80Q9BSJ5 609 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 HERC2P3Q9BVR0 1158 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 EFCAB1Q9HAE3 211 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ZFYVE28Q9HCC9 887 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 TMEM8AQ9HCN3 771 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 VAV3Q9UKW4 847 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 TCAF1Q9Y4C2 921 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 PCDHB12Q9Y5F1 795 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 FRMPD2Q68DX3 1309 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 ARID2Q68CP9 1835 aa9.23□□□□□ -0.93
SMARCE1-207ENST00000469334 SFI1A8K8P3 1242 aa9.22□□□□□ -0.93
SMARCE1-207ENST00000469334 PLOD2O00469 737 aa9.22□□□□□ -0.93
SMARCE1-207ENST00000469334 VWA5AO00534 786 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms