RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 GPR158Q5T848 1215 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF697Q5TEC3 545 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 TMC5Q6UXY8 1006 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 RFX8Q6ZV50 586 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 C14orf80Q86SX3 495 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 MIB1Q86YT6 1006 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 NPAS3Q8IXF0 933 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 MAB21L3Q8N8X9 362 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 SMRP1Q8NCR6 262 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 ITFG1Q8TB96 612 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 USP13Q92995 863 aaPredicted RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 FATE1Q969F0 183 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 CARD6Q9BX69 1037 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 KIF9Q9HAQ2 790 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 GKN1Q9NS71 199 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 KLHL11Q9NVR0 708 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 SMARCAL1Q9NZC9 954 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 PCYOX1Q9UHG3 505 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 AGO1Q9UL18 857 aaKnown RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 DRG1Q9Y295 367 aaKnown RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 MRPS23Q9Y3D9 190 aaKnown RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 NEU2Q9Y3R4 380 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 CPQQ9Y646 472 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 CHD5Q8TDI0 1954 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 DOCK8Q8NF50 2099 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 E9PAM4 449 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 CST8O60676 142 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 CSPG5O95196 566 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 SLU7O95391 586 aaKnown RBP8.41□□□□□ -1.06
NPHP3-204ENST00000469232 MBL2P11226 248 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-204ENST00000469232 RHOQP17081 205 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 GJA1P17302 382 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 FSHRP23945 695 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 ARL4AP40617 200 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 SLC11A2P49281 568 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 DNA2P51530 1060 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF33AQ06730 810 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 XRCC4Q13426 336 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 KRT81Q14533 505 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 LONRF2Q1L5Z9 754 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 PUS10Q3MIT2 529 aaKnown RBP8.41□□□□□ -1.06
NPHP3-204ENST00000469232 RARS2Q5T160 578 aaKnown RBP8.41□□□□□ -1.06
NPHP3-204ENST00000469232 MPP7Q5T2T1 576 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 NCBP2-AS2Q69YL0 99 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 FBXL22Q6P050 247 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 CHST9Q7L1S5 443 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 UMODL1-AS1Q8N2C9 162 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 LZTR1Q8N653 840 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 RTL3Q8N8U3 475 aaKnown RBP8.41□□□□□ -1.06
NPHP3-204ENST00000469232 RIN3Q8TB24 985 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 OTUB2Q96DC9 234 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 RTP4Q96DX8 246 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 CAPZA3Q96KX2 299 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 ZSWIM3Q96MP5 696 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 CALN1Q9BXU9 219 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 SLITRK6Q9H5Y7 841 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 RBM12Q9NTZ6 932 aaKnown RBP8.41□□□□□ -1.06
NPHP3-204ENST00000469232 TDP1Q9NUW8 608 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 ETNK2Q9NVF9 386 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 TMEM248Q9NWD8 314 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 DONSONQ9NYP3 566 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 R3HDM2Q9Y2K5 976 aaKnown RBP8.41□□□□□ -1.06
NPHP3-204ENST00000469232 SNX10Q9Y5X0 201 aa8.41□□□□□ -1.06
NPHP3-204ENST00000469232 ZFP37Q9Y6Q3 630 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-204ENST00000469232 SYNJ2BP-COX16A0A087WUM0 186 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CTAGE15A4D2H0 777 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 EFCAB8A8MWE9 144 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 LEFTY2O00292 366 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 EEF2KO00418 725 aaKnown RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 KRIT1O00522 736 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CTIFO43310 598 aaKnown RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 LIASO43766 372 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 PHF2O75151 1096 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF189O75820 626 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 PRAMEF12O95522 483 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CKMP06732 381 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 ITGAVP06756 1048 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CTAGE8P0CG41 777 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 ERCC2P18074 760 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 TACR2P21452 398 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 AMPD1P23109 780 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 FCARP24071 287 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CORO1AP31146 461 aaKnown RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 SLC6A4P31645 630 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CHRNA3P32297 505 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 GJC1P36383 396 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 GGCXP38435 758 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 MTHFRP42898 656 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 TERF1P54274 439 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 TPI1P60174 286 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 SLC10A2Q12908 348 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 GLE1Q53GS7 698 aaKnown RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 PPP6R3Q5H9R7 873 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CCDC181Q5TID7 509 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 TTC39BQ5VTQ0 682 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CTAGE6Q86UF2 777 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 LRRC49Q8IUZ0 686 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 ARID3BQ8IVW6 561 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-204ENST00000469232 ARHGAP12Q8IWW6 846 aa8.4□□□□□ -1.06
NPHP3-204ENST00000469232 CTAGE4Q8IX94 777 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms