RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FAM72BQ86X60 149 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 LRRC49Q8IUZ0 686 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 PALM2Q8IXS6 379 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 CCDC13Q8IYE1 715 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 ZNF276Q8N554 614 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 ATPAF2Q8N5M1 289 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 COLGALT1Q8NBJ5 622 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 FBXO36Q8NEA4 188 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 CCDC110Q8TBZ0 833 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 P2RY11Q96G91 374 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 C1orf74Q96LT6 269 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 PWWP2AQ96N64 755 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 UBE2OQ9C0C9 1292 aaKnown RBP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 PRDM12Q9H4Q4 367 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 NMUR1Q9HB89 426 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 SPG21Q9NZD8 308 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 SENP1Q9P0U3 644 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 IGSF9Q9P2J2 1179 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 PSMC3IPQ9P2W1 217 aaPredicted RBP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 SSX2IPQ9Y2D8 614 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 HBS1LQ9Y450 684 aaKnown RBP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 MFHAS1Q9Y4C4 1052 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 ACTL7BQ9Y614 415 aa9.61□□□□□ -0.87
SMC1A-205ENST00000469129 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.61□□□□□ -0.87
SMC1A-205ENST00000469129 MYLKQ15746 1914 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 WASH4PA8MWX3 477 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 KCNU1A8MYU2 1149 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 E9PAM4 449 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 AP3B1O00203 1094 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 PSMD3O43242 534 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 MSI1O43347 362 aaKnown RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 MOCS2O96007 188 aaPredicted RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 CPP00450 1065 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 ZDHHC11BP0C7U3 371 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 CSH1P0DML2 217 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 CSH2P0DML3 217 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 OR1D2P34982 312 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 MDH1P40925 334 aaKnown RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 SLCO1A2P46721 670 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 ATP1A2P50993 1020 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 USP46P62068 366 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 DSG1Q02413 1049 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 EFEMP1Q12805 493 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 TAF10Q12962 218 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 DUSP4Q13115 394 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 PLD1Q13393 1074 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 PPIGQ13427 754 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 FASTKD3Q14CZ7 662 aaKnown RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 PARP6Q2NL67 630 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 TNFAIP8L3Q5GJ75 292 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 C10orf120Q5SQS8 335 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 FNBP1LQ5T0N5 605 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 SDHAF4Q5VUM1 108 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 RWDD4Q6NW29 188 aaKnown RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 DDX53Q86TM3 631 aaKnown RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 CCNJLQ8IV13 435 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 ANKMY2Q8IV38 441 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 TAB3Q8N5C8 712 aaPredicted RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 TTC9BQ8N6N2 239 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 STKLD1Q8NE28 680 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 SLC39A13Q96H72 371 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 BTN2A3PQ96KV6 586 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 FCRL2Q96LA5 508 aaPredicted RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 CYTH2Q99418 400 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 LGMNQ99538 433 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 SELENOSQ9BQE4 189 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 MAGEB5Q9BZ81 275 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 RETREG1Q9H6L5 497 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 ACSS3Q9H6R3 686 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 ETNK1Q9HBU6 452 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 LRRC4CQ9HCJ2 640 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 IL23AQ9NPF7 189 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 ANLNQ9NQW6 1124 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 MARCH2Q9P0N8 246 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 SEPT10Q9P0V9 454 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 KLHL8Q9P2G9 620 aaPredicted RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 PPARGC1AQ9UBK2 798 aaKnown RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 UXTQ9UBK9 157 aaPredicted RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 PRKAG2Q9UGJ0 569 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 SFMBT1Q9UHJ3 866 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 ZMYND8Q9ULU4 1186 aaPredicted RBP9.6□□□□□ -0.87
SMC1A-205ENST00000469129 CHMP2BQ9UQN3 213 aa9.6□□□□□ -0.87
SMC1A-205ENST00000469129 TCRBV7S3A2A0A539 114 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 I6L893 689 aaPredicted RBP9.59□□□□□ -0.87
SMC1A-205ENST00000469129 VNN2O95498 520 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 IGLV3-27P01718 113 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 SRGAP2BP0DMP2 458 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 CSF2RAP15509 400 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 ATF6P18850 670 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 CCNCP24863 283 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 DNAJB2P25686 324 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 ELK3P41970 407 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 MAGEA3P43357 314 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 MMP13P45452 471 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 ALDH1A3P47895 512 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 PPP3CCP48454 512 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 TUBP50607 506 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 GEMIN4P57678 1058 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms