RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 TACR2P21452 398 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 HTR7P34969 479 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 NR2C2P49116 596 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 VCPP55072 806 aaKnown RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 EIF3EP60228 445 aaKnown RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 MTA1Q13330 715 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 ARHGAP15Q53QZ3 475 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 ALFQ53S48 1182 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 ACBD5Q5T8D3 534 aaPredicted RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 TMCO3Q6UWJ1 677 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 LRRC31Q6UY01 552 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 CCDC33Q8N5R6 958 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 NPWQ8N729 165 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 TTC16Q8NEE8 873 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 ING5Q8WYH8 240 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 TMEM121Q9BTD3 319 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 FRMD8P1Q9BZ68 369 aaPredicted RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 KLC2Q9H0B6 622 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 NDFIP2Q9NV92 336 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 PPARGC1AQ9UBK2 798 aaKnown RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 ZNF148Q9UQR1 794 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 CCL26Q9Y258 94 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 DOCK4Q8N1I0 1966 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 ZSCAN5CA6NGD5 496 aaPredicted RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 SOBPA7XYQ1 873 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 TRDMT1O14717 391 aaKnown RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 MFSD11O43934 449 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 CNTN5O94779 1100 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 AVPR1AP37288 418 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 DLX2Q07687 328 aaPredicted RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 DHX34Q14147 1143 aaKnown RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 C5orf22Q49AR2 442 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 ADGRF1Q5T601 910 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 Q6ZNB5 142 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 HTR3DQ70Z44 454 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 GPR149Q86SP6 731 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 NLRP14Q86W24 1093 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 CHSY1Q86X52 802 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 LGI2Q8N0V4 545 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 CFAP52Q8N1V2 620 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 GPR161Q8N6U8 529 aaKnown RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 SLCO2A1Q92959 643 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 USP13Q92995 863 aaPredicted RBP13.22□□□□□ -0.29
RUNX1-213ENST00000469087 PNKPQ96T60 521 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 TRIM51Q9BSJ1 452 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 CATSPERBQ9H7T0 1116 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 CLEC1BQ9P126 229 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 CFAP97Q9P2B7 532 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 STOML2Q9UJZ1 356 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 ARHGAP26Q9UNA1 814 aa13.22□□□□□ -0.29
RUNX1-213ENST00000469087 TMEM265A0A087WTH1 108 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 LEFTY2O00292 366 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 FGF10O15520 208 aaPredicted RBP13.21□□□□□ -0.29
RUNX1-213ENST00000469087 ITGAVP06756 1048 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 TRADDQ15628 312 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 FAM182AQ5T1J6 154 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 PRUNE1Q86TP1 453 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 JAMLQ86YT9 394 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 RIN3Q8TB24 985 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 SH3RF2Q8TEC5 729 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 CCDC114Q96M63 670 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 RUNDC3BQ96NL0 473 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 RPRD1AQ96P16 312 aaPredicted RBP13.21□□□□□ -0.29
RUNX1-213ENST00000469087 OLFM3Q96PB7 478 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 PARD6BQ9BYG5 372 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 ZYG11BQ9C0D3 744 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 TDP1Q9NUW8 608 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 FEZ2Q9UHY8 353 aaPredicted RBP13.21□□□□□ -0.29
RUNX1-213ENST00000469087 NEU2Q9Y3R4 380 aa13.21□□□□□ -0.29
RUNX1-213ENST00000469087 XIRP2A4UGR9 3374 aa13.21□□□□□ -0.3
RUNX1-213ENST00000469087 WASH4PA8MWX3 477 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 F5H5T6 163 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 H7C0C1 242 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 MCF2LO15068 1137 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 HEXIM1O94992 359 aaKnown RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ECEL1O95672 775 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 RHOQP17081 205 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 POU3F3P20264 500 aaPredicted RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ATP5OP48047 213 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 SGSHP51688 502 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 GUCY2DQ02846 1103 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 CTC1Q2NKJ3 1217 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 CCDC70Q6NSX1 233 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 DARS2Q6PI48 645 aaKnown RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 BZW1Q7L1Q6 419 aaKnown RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 CIR1Q86X95 450 aaPredicted RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ARID3BQ8IVW6 561 aaPredicted RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 GLIS1Q8NBF1 620 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 CELF6Q96J87 481 aaKnown RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 LGMNQ99538 433 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 USP29Q9HBJ7 922 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 EPB41L5Q9HCM4 733 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ZNF212Q9UDV6 495 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 SH3BP1Q9Y3L3 701 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 CLUHO75153 1309 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 TRIOBPQ9H2D6 2365 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 TARSL2A2RTX5 802 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms